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PDB 5VP2

X-RAY DIFFRACTION2.80 Å0 chains110 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (110)

#ChainDomain IDRangeFamilyClassification
110e5vp210110:2-84325.1.8.0325 → 325.1 → 325.1.8
211e5vp211111:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
312e5vp212112:1-70Ribosomal_L29192 → 192.4 → 192.4.1
413e5vp213113:2-60Ribosomal_L30887 → 887.1 → 887.1.1
514e5vp214114:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
615e5vp215115:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
716e5vp216116:2-54Ribosomal_L33375 → 375.1 → 375.1.1
817e5vp217117:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
918e5vp218118:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
1019e5vp219119:1-37Ribosomal_L36919 → 919.1 → 919.1.1
111be5vp21b11b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
121ce5vp21c11c:2-106KH_2327 → 327.11 → 327.11.1
131ce5vp21c21c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
141de5vp21d11d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
151De5vp21D11D:2-126Ribosomal_L22 → 2.1 → 2.1.1
161De5vp21D21D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
171ee5vp21e11e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
181ee5vp21e21e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
191Ee5vp21E11E:1-204Ribosomal_L31 → 1.1 → 1.1.7
201fe5vp21f11f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
211Fe5vp21F11F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
221ge5vp21g11g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
231Ge5vp21G11G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
241he5vp21h11h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
251he5vp21h21h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
261He5vp21H11H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
271He5vp21H21H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
281ie5vp21i11i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
291Ie5vp21I11I:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
301Ie5vp21I21I:56-146Ribosomal_L9_C523 → 523.1 → 523.1.1
311je5vp21j11j:4-100Ribosomal_S10304 → 304.44 → 304.44.1
321ke5vp21k11k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
331le5vp21l11l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
341me5vp21m11m:2-124Ribosomal_S13102 → 102.2 → 102.2.1
351ne5vp21n11n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
361Ne5vp21N11N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
371oe5vp21o11o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
381Oe5vp21O11O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
391pe5vp21p11p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
401Pe5vp21P11P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
411qe5vp21q11q:2-100Ribosomal_S172 → 2.1 → 2.1.1
421Qe5vp21Q11Q:1-141325.1.5.0325 → 325.1 → 325.1.5
431re5vp21r11r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
441Re5vp21R11R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
451se5vp21s11s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
461Se5vp21S11S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
471te5vp21t11t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
481Te5vp21T11T:1-131Ribosomal_L194 → 4.1 → 4.1.1
491Ue5vp21U11U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
501Ve5vp21V11V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
511We5vp21W11W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
521Xe5vp21X11X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
531Ye5vp21Y11Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
541Ze5vp21Z11Z:1-93Ribosomal_L25p239 → 239.1 → 239.1.1
551Ze5vp21Z21Z:94-171Ribosomal_TL5_C240 → 240.1 → 240.1.1
5620e5vp220120:2-84325.1.8.0325 → 325.1 → 325.1.8
5721e5vp221121:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
5822e5vp222122:1-70Ribosomal_L29192 → 192.4 → 192.4.1
5923e5vp223123:2-60Ribosomal_L30887 → 887.1 → 887.1.1
6024e5vp224124:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
6125e5vp225125:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
6226e5vp226126:2-54Ribosomal_L33375 → 375.1 → 375.1.1
6327e5vp227127:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
6428e5vp228128:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
6529e5vp229129:1-37Ribosomal_L36919 → 919.1 → 919.1.1
662be5vp22b12b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
672ce5vp22c12c:2-106KH_2327 → 327.11 → 327.11.1
682ce5vp22c22c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
692de5vp22d12d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
702De5vp22D12D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
712De5vp22D22D:2-126Ribosomal_L22 → 2.1 → 2.1.1
722ee5vp22e12e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
732ee5vp22e22e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
742Ee5vp22E12E:1-204Ribosomal_L31 → 1.1 → 1.1.7
752fe5vp22f12f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
762Fe5vp22F12F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
772ge5vp22g12g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
782Ge5vp22G12G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
792he5vp22h12h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
802he5vp22h22h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
812He5vp22H12H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
822He5vp22H22H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
832ie5vp22i12i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
842Ie5vp22I12I:56-146Ribosomal_L9_C523 → 523.1 → 523.1.1
852Ie5vp22I22I:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
862je5vp22j12j:5-100Ribosomal_S10304 → 304.44 → 304.44.1
872ke5vp22k12k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
882le5vp22l12l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
892me5vp22m12m:3-124Ribosomal_S13102 → 102.2 → 102.2.1
902ne5vp22n12n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
912Ne5vp22N12N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
922oe5vp22o12o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
932Oe5vp22O12O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
942pe5vp22p12p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
952Pe5vp22P12P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
962qe5vp22q12q:2-100Ribosomal_S172 → 2.1 → 2.1.1
972Qe5vp22Q12Q:1-141325.1.5.0325 → 325.1 → 325.1.5
982re5vp22r12r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
992Re5vp22R12R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
1002se5vp22s12s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
1012Se5vp22S12S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
1022te5vp22t12t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
1032Te5vp22T12T:1-131Ribosomal_L194 → 4.1 → 4.1.1
1042Ue5vp22U12U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
1052Ve5vp22V12V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
1062We5vp22W12W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
1072Xe5vp22X12X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
1082Ye5vp22Y12Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
1092Ze5vp22Z12Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
1102Ze5vp22Z22Z:93-174Ribosomal_TL5_C240 → 240.1 → 240.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors