PDB 5VYZ
X-RAY DIFFRACTION2.30 Å0 chains32 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (32)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5vyzA1 | A:944-988 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 2 | A | e5vyzA2 | A:1060-1137 | Biotin_lipoyl | 325 → 325.1 → 325.1.7 |
| 3 | A | e5vyzA3 | A:482-821 | HMGL-like | 2002 → 2002.1 → 2002.1.1 |
| 4 | A | e5vyzA4 | A:334-454 | Biotin_carb_C | 325 → 325.1 → 325.1.1 |
| 5 | A | e5vyzA5 | A:455-481,A:989-1059 | 3794.1.2.0 | 3794 → 3794.1 → 3794.1.2 |
| 6 | A | e5vyzA6 | A:1-114 | Biotin_carb_N | 2003 → 2003.1 → 2003.1.10 |
| 7 | A | e5vyzA7 | A:822-943 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 8 | A | e5vyzA8 | A:115-333 | CPSase_L_D2 | 206 → 206.1 → 206.1.3 |
| 9 | B | e5vyzB1 | B:334-454 | Biotin_carb_C | 325 → 325.1 → 325.1.1 |
| 10 | B | e5vyzB2 | B:1-114 | Biotin_carb_N | 2003 → 2003.1 → 2003.1.10 |
| 11 | B | e5vyzB3 | B:944-988 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 12 | B | e5vyzB4 | B:115-333 | CPSase_L_D2 | 206 → 206.1 → 206.1.3 |
| 13 | B | e5vyzB5 | B:822-943 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 14 | B | e5vyzB6 | B:482-821 | HMGL-like | 2002 → 2002.1 → 2002.1.1 |
| 15 | B | e5vyzB7 | B:455-481,B:989-1059 | 3794.1.2.0 | 3794 → 3794.1 → 3794.1.2 |
| 16 | B | e5vyzB8 | B:1060-1137 | Biotin_lipoyl | 325 → 325.1 → 325.1.7 |
| 17 | C | e5vyzC1 | C:115-134,C:197-332 | CPSase_L_D2 | 206 → 206.1 → 206.1.3 |
| 18 | C | e5vyzC2 | C:333-453 | Biotin_carb_C | 325 → 325.1 → 325.1.1 |
| 19 | C | e5vyzC3 | C:485-821 | HMGL-like | 2002 → 2002.1 → 2002.1.1 |
| 20 | C | e5vyzC4 | C:454-484,C:989-1054 | 3794.1.2.0 | 3794 → 3794.1 → 3794.1.2 |
| 21 | C | e5vyzC5 | C:1055-1137 | Biotin_lipoyl | 325 → 325.1 → 325.1.7 |
| 22 | C | e5vyzC6 | C:1-114 | Biotin_carb_N | 2003 → 2003.1 → 2003.1.10 |
| 23 | C | e5vyzC7 | C:944-988 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 24 | C | e5vyzC8 | C:822-943 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 25 | D | e5vyzD1 | D:822-943 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 26 | D | e5vyzD2 | D:944-988 | PYC_OADA | 103 → 103.5 → 103.5.1 |
| 27 | D | e5vyzD3 | D:1-114 | Biotin_carb_N | 2003 → 2003.1 → 2003.1.10 |
| 28 | D | e5vyzD4 | D:334-454 | Biotin_carb_C | 325 → 325.1 → 325.1.1 |
| 29 | D | e5vyzD5 | D:482-821 | HMGL-like | 2002 → 2002.1 → 2002.1.1 |
| 30 | D | e5vyzD6 | D:1060-1137 | Biotin_lipoyl | 325 → 325.1 → 325.1.7 |
| 31 | D | e5vyzD7 | D:455-481,D:989-1059 | 3794.1.2.0 | 3794 → 3794.1 → 3794.1.2 |
| 32 | D | e5vyzD8 | D:115-333 | CPSase_L_D2 | 206 → 206.1 → 206.1.3 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors