PDB 5VZJ
X-RAY DIFFRACTION3.30 Å0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsChain Gview chain
3 domainsChain Iview chain
2 domainsChain Jview chain
2 domainsAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5vzjA1 | A:187-304 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 2 | A | e5vzjA2 | A:3-186 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 3 | B | e5vzjB1 | B:1-152 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 4 | B | e5vzjB2 | B:153-241 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 5 | C | e5vzjC1 | C:9-99,C:123-248,C:274-286 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 6 | C | e5vzjC2 | C:287-393 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 7 | D | e5vzjD1 | D:126-223 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 8 | D | e5vzjD2 | D:2-125 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 9 | E | e5vzjE1 | E:181-264 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 10 | E | e5vzjE2 | E:1-180 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 11 | F | e5vzjF1 | F:183-248 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 12 | F | e5vzjF2 | F:8-21,F:42-185 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 13 | G | e5vzjG1 | G:62-151 | RRP40_S1 | 2 → 2.1 → 2.1.1 |
| 14 | G | e5vzjG2 | G:0-63 | Rrp40_N | 325 → 325.1 → 325.1.8 |
| 15 | G | e5vzjG3 | G:152-236 | KH_6 | 327 → 327.11 → 327.11.2 |
| 16 | H | e5vzjH1 | H:4-16,H:52-101 | ECR1_N | 325 → 325.1 → 325.1.8 |
| 17 | H | e5vzjH2 | H:196-246,H:276-356 | KH_6 | 327 → 327.11 → 327.11.2 |
| 18 | H | e5vzjH3 | H:102-196 | RRP4_S1 | 2 → 2.1 → 2.1.1 |
| 19 | I | e5vzjI1 | I:120-160,I:186-290 | EXOSC1 | 2 → 2.1 → 2.1.1 |
| 20 | I | e5vzjI2 | I:4-67,I:107-119 | CSL4_N | 325 → 325.1 → 325.1.8 |
| 21 | J | e5vzjJ1 | J:128-420 | DNA_pol_A_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 22 | J | e5vzjJ2 | J:421-518 | HRDC | 102 → 102.1 → 102.1.1 |
| 23 | K | e5vzjK1 | K:237-399 | Rrp44_CSD1 | 2 → 2.1 → 2.1.1 |
| 24 | K | e5vzjK2 | K:911-1001 | Rrp44_S1 | 2 → 2.1 → 2.1.1 |
| 25 | K | e5vzjK3 | K:495-910 | RNB | 2 → 2.9 → 2.9.1 |
| 26 | K | e5vzjK4 | K:36-236 | PIN_4 | 2006 → 2006.1 → 2006.1.4 |
| 27 | K | e5vzjK5 | K:400-494 | OB_Dis3 | 2 → 2.1 → 2.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors