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PDB 5W1S

X-RAY DIFFRACTION3.80 Å0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
1Ae5w1sA1A:237-325RNA_pol_A_CTD102 → 102.1 → 102.1.1
2Ae5w1sA2A:7-52,A:179-236RNA_pol_L305 → 305.1 → 305.1.1
3Ae5w1sA3A:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
4Be5w1sB1B:6-52,B:179-233RNA_pol_L305 → 305.1 → 305.1.1
5Be5w1sB2B:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
6Ce5w1sC1C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
7Ce5w1sC2C:939-10573681.1.1.03681 → 3681.1 → 3681.1.1
8Ce5w1sC3C:791-828,C:1058-1237RNA_pol_Rpb2_61 → 1.1 → 1.1.2
9Ce5w1sC4C:227-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
10Ce5w1sC5C:153-226,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
11Ce5w1sC6C:828-938RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
12Ce5w1sC7C:3-152,C:450-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
13Ce5w1sC8C:235-288275.1.1.0275 → 275.1 → 275.1.1
14Ce5w1sC9C:578-714RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
15Ce5w1sC10C:1238-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
16De5w1sD1D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
17De5w1sD2D:895-931,D:1135-1151,D:1216-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
18De5w1sD3D:8-3334246.1.1.04246 → 4246.1 → 4246.1.1
19De5w1sD4D:811-894275.1.1.0275 → 275.1 → 275.1.1
20De5w1sD5D:334-377,D:418-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
21De5w1sD6D:1152-1215325.1.7.0325 → 325.1 → 325.1.7
22De5w1sD7D:378-4174951.1.1.04951 → 4951.1 → 4951.1.1
23De5w1sD8D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
24Ee5w1sE1E:2-90RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe5w1sF1F:502-612Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
26Fe5w1sF2F:448-501Sigma70_r3101 → 101.1 → 101.1.1
27Fe5w1sF3F:94-167,F:213-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
28Ge5w1sG1G:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
29Ge5w1sG2G:7-52,G:179-233RNA_pol_L305 → 305.1 → 305.1.1
30He5w1sH1H:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
31He5w1sH2H:6-52,H:179-233RNA_pol_L305 → 305.1 → 305.1.1
32Ie5w1sI1I:939-10573681.1.1.03681 → 3681.1 → 3681.1.1
33Ie5w1sI2I:3-152,I:450-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
34Ie5w1sI3I:578-714RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
35Ie5w1sI4I:153-226,I:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
36Ie5w1sI5I:1238-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
37Ie5w1sI6I:828-938RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
38Ie5w1sI7I:227-234,I:289-342275.1.1.0275 → 275.1 → 275.1.1
39Ie5w1sI8I:235-288275.1.1.0275 → 275.1 → 275.1.1
40Ie5w1sI9I:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
41Ie5w1sI10I:791-828,I:1058-1237RNA_pol_Rpb2_61 → 1.1 → 1.1.2
42Je5w1sJ1J:639-811RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
43Je5w1sJ2J:812-931RNA_pol_Rpb1_5275 → 275.1 → 275.1.1
44Je5w1sJ3J:1214-1375RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
45Je5w1sJ4J:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
46Je5w1sJ5J:16-3414246.1.1.04246 → 4246.1 → 4246.1.1
47Je5w1sJ6J:1137-1215325.1.7.0325 → 325.1 → 325.1.7
48Je5w1sJ7J:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
49Ke5w1sK1K:2-73RNA_pol_Rpb6152 → 152.1 → 152.1.2
50Le5w1sL1L:508-613Sigma70_r4101 → 101.1 → 101.1.1
51Le5w1sL2L:447-507Sigma70_r3101 → 101.1 → 101.1.1
52Le5w1sL3L:94-167,L:213-446Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
53Me5w1sM1M:4-73zf-dskA_traR377 → 377.1 → 377.1.1
54Ne5w1sN1N:4-72zf-dskA_traR377 → 377.1 → 377.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors