PDB 5WDU
X-RAY DIFFRACTION7.00 Å0 chains42 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
1 domainChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Hview chain
2 domainsChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
2 domainsChain Nview chain
2 domainsChain Oview chain
1 domainChain Pview chain
1 domainChain Rview chain
1 domainChain Sview chain
2 domainsChain Tview chain
2 domainsChain Uview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
1 domainChain Xview chain
1 domainAll Domains (42)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5wduA1 | A:518-547,A:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 2 | B | e5wduB1 | B:109-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 3 | B | e5wduB2 | B:6-108 | V-set | 11 → 11.1 → 11.1.1 |
| 4 | C | e5wduC1 | C:111-211 | C1-set | 11 → 11.1 → 11.1.1 |
| 5 | C | e5wduC2 | C:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 6 | D | e5wduD1 | D:1-124 | V-set | 11 → 11.1 → 11.1.1 |
| 7 | E | e5wduE1 | E:1-99 | GP120 | 11 → 11.1 → 11.1.1 |
| 8 | F | e5wduF1 | F:32-119,F:203-255,F:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 9 | F | e5wduF2 | F:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 10 | F | e5wduF3 | F:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 11 | G | e5wduG1 | G:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 12 | G | e5wduG2 | G:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 13 | G | e5wduG3 | G:32-119,G:203-255,G:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 14 | H | e5wduH1 | H:108-224 | C1-set | 11 → 11.1 → 11.1.1 |
| 15 | H | e5wduH2 | H:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 16 | I | e5wduI1 | I:108-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 17 | I | e5wduI2 | I:2-107 | V-set | 11 → 11.1 → 11.1.1 |
| 18 | J | e5wduJ1 | J:518-547,J:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 19 | K | e5wduK1 | K:109-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 20 | K | e5wduK2 | K:6-108 | V-set | 11 → 11.1 → 11.1.1 |
| 21 | L | e5wduL1 | L:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 22 | L | e5wduL2 | L:111-211 | C1-set | 11 → 11.1 → 11.1.1 |
| 23 | M | e5wduM1 | M:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 24 | M | e5wduM2 | M:108-224 | C1-set | 11 → 11.1 → 11.1.1 |
| 25 | N | e5wduN1 | N:2-107 | V-set | 11 → 11.1 → 11.1.1 |
| 26 | N | e5wduN2 | N:108-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 27 | O | e5wduO1 | O:2-124 | V-set | 11 → 11.1 → 11.1.1 |
| 28 | P | e5wduP1 | P:1-99 | V-set | 11 → 11.1 → 11.1.1 |
| 29 | Q | e5wduQ1 | Q:32-119,Q:203-255,Q:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 30 | Q | e5wduQ2 | Q:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 31 | Q | e5wduQ3 | Q:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 32 | R | e5wduR1 | R:518-547,R:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 33 | S | e5wduS1 | S:109-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 34 | S | e5wduS2 | S:6-108 | V-set | 11 → 11.1 → 11.1.1 |
| 35 | T | e5wduT1 | T:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 36 | T | e5wduT2 | T:111-211 | C1-set | 11 → 11.1 → 11.1.1 |
| 37 | U | e5wduU1 | U:108-224 | C1-set | 11 → 11.1 → 11.1.1 |
| 38 | U | e5wduU2 | U:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 39 | V | e5wduV1 | V:108-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 40 | V | e5wduV2 | V:2-107 | V-set | 11 → 11.1 → 11.1.1 |
| 41 | W | e5wduW1 | W:1-124 | V-set | 11 → 11.1 → 11.1.1 |
| 42 | X | e5wduX1 | X:1-99 | GP120 | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors