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PDB 5WYJ

ELECTRON MICROSCOPY0 chains75 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (75)

#ChainDomain IDRangeFamilyClassification
13Be5wyj3B13B:84-322Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce5wyj3C13C:84-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De5wyj3D13D:288-329,3D:370-417Nop102 → 102.1 → 102.1.4
43De5wyj3D23D:168-298Nop606 → 606.1 → 606.1.1
53De5wyj3D33D:8-167NOP5NT3407 → 3407.1 → 3407.1.1
63Ee5wyj3E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee5wyj3E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee5wyj3E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe5wyj3F13F:130-361,3F:398-442,3F:474-570WD405 → 5.1 → 5.1.4
103Ge5wyj3G13G:5-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He5wyj3H13H:5-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
12B1e5wyjB11B1:33-214AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
13B1e5wyjB12B1:929-1016RIBIOP_C1 → 1.1 → 1.1.7
14B1e5wyjB13B1:818-928RIBIOP_C1 → 1.1 → 1.1.8
15B1e5wyjB14B1:215-284,B1:614-636,B1:787-817AARP2CN1 → 1.1 → 1.1.7
16BAe5wyjBA2BA:343-620,BA:679-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
17BAe5wyjBA3BA:735-852Utp12109 → 109.54 → 109.54.1
18BAe5wyjBA4BA:1-222,BA:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
19BBe5wyjBB2BB:747-773,BB:793-913Utp12109 → 109.54 → 109.54.1
20BBe5wyjBB3BB:41-275,BB:321-386WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
21BBe5wyjBB4BB:11-40,BB:386-685WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
22BCe5wyjBC1BC:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
23BCe5wyjBC2BC:650-817Utp13109 → 109.54 → 109.54.1
24BCe5wyjBC3BC:3-331WD405 → 5.1 → 5.1.4
25BDe5wyjBD1BD:235-591WD405 → 5.1 → 5.1.4
26BEe5wyjBE1BE:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
27BEe5wyjBE2BE:350-671,BE:793-805WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
28BEe5wyjBE3BE:814-939Utp21109 → 109.54 → 109.54.1
29CAe5wyjCA1CA:3-216RRM_Rrp7304 → 304.9 → 304.9.1
30CBe5wyjCB1CB:699-905Nrap_D4316 → 316.1 → 316.1.1
31CBe5wyjCB2CB:515-698Nrap_D3304 → 304.20 → 304.20.1
32CBe5wyjCB3CB:1092-1237Nrap_D6304 → 304.20 → 304.20.1
33CBe5wyjCB4CB:906-983,CB:1010-1091Nrap_D5102 → 102.1 → 102.1.3
34CBe5wyjCB5CB:357-514Nrap_D2102 → 102.1 → 102.1.3
35CBe5wyjCB6CB:81-356Nrap316 → 316.1 → 316.1.1
36E1e5wyjE11E1:28-252EMG12488 → 2488.1 → 2488.1.1
37E2e5wyjE21E2:28-252EMG12488 → 2488.1 → 2488.1.1
38E3e5wyjE31E3:205-465Bystin109 → 109.4 → 109.4.1
39K1e5wyjK11K1:38-119KH_8327 → 327.11 → 327.11.2
40K1e5wyjK12K1:120-212KRR1-like_KH2327 → 327.11 → 327.11.2
41MAe5wyjMA1MA:29-161Ribosomal_S4,S4221 → 221.1 → 221.1.2
42MBe5wyjMB1MB:84-267Brix7502 → 7502.1 → 7502.1.1
43P1e5wyjP11P1:94-177KH_8327 → 327.11 → 327.11.2
44P1e5wyjP12P1:178-266KH_PNO1_2nd327 → 327.11 → 327.11.2
45R1e5wyjR11R1:183-287RTC_insert2485 → 2485.2 → 2485.2.1
46R1e5wyjR12R1:7-182,R1:287-361RTC328 → 328.6 → 328.6.1
47R2e5wyjR21R2:1408-1418,R2:1457-1721HAT_PRP39_N109 → 109.4 → 109.4.1
48Sce5wyjSc1Sc:4-82Ribosomal_S27e375 → 375.1 → 375.1.1
49SCe5wyjSC1SC:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
50SCe5wyjSC2SC:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
51Sde5wyjSd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
52Sfe5wyjSf1Sf:23-52Ribosomal_S303168 → 3168.1 → 3168.1.1
53SFe5wyjSF1SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
54SFe5wyjSF2SF:9-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
55SFe5wyjSF3SF:176-245KOW,40S_S4_C4 → 4.1 → 4.1.1
56Sge5wyjSg1Sg:102-152Ribosomal_S27375 → 375.1 → 375.1.1
57SGe5wyjSG1SG:20-225Ribosomal_S7167 → 167.1 → 167.1.1
58SHe5wyjSH1SH:1-128,SH:181-226Ribosomal_S6e239 → 239.1 → 239.1.1
59SIe5wyjSI1SI:4-98Ribosomal_S7e327 → 327.18 → 327.18.1
60SIe5wyjSI2SI:118-187Ribosomal_S7e327 → 327.18 → 327.18.1
61SJe5wyjSJ1SJ:2-123,SJ:153-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
62SKe5wyjSK1SK:12-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
63SMe5wyjSM1SM:2-142Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
64SNe5wyjSN1SN:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
65SOe5wyjSO1SO:9-82Ribosomal_S13_N101 → 101.40 → 101.40.1
66SOe5wyjSO2SO:83-142Ribosomal_S15616 → 616.1 → 616.1.1
67SPe5wyjSP1SP:11-119Ribosomal_S112484 → 2484.1 → 2484.1.1
68SRe5wyjSR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
69SXe5wyjSX1SX:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
70SXe5wyjSX2SX:2-67Ribosomal_S8320 → 320.2 → 320.2.1
71SYe5wyjSY1SY:43-145Ribosom_S12_S232 → 2.1 → 2.1.1
72SZe5wyjSZ1SZ:2-102Ribosomal_S24e304 → 304.109 → 304.109.1
73U4e5wyjU41U4:57-182Fcf12006 → 2006.1 → 2006.1.4
74U5e5wyjU51U5:8-63,U5:179-255Ribosomal_L1898 → 898.1 → 898.1.1
75U5e5wyjU52U5:64-178Ribosomal_L12007 → 2007.25 → 2007.25.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors