PDB 5X51
X-RAY DIFFRACTION7.00 Å0 chains60 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
9 domainsChain Nview chain
7 domainsChain Oview chain
2 domainsChain Pview chain
1 domainChain Qview chain
2 domainsChain Rview chain
1 domainChain Sview chain
2 domainsChain Tview chain
1 domainChain Uview chain
2 domainsChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainAll Domains (60)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5x51A1 | A:521-663 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 2 | A | e5x51A2 | A:1062-1104,A:1304-1453 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 3 | A | e5x51A3 | A:6-337 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 4 | A | e5x51A4 | A:338-375,A:437-520 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e5x51A5 | A:873-1061 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 6 | A | e5x51A6 | A:1134-1244 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 7 | A | e5x51A7 | A:664-872 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 8 | A | e5x51A8 | A:376-436 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 9 | A | e5x51A9 | A:1105-1133,A:1245-1303 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 10 | B | e5x51B1 | B:210-397 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | B | e5x51B2 | B:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | B | e5x51B3 | B:1098-1224 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 13 | B | e5x51B4 | B:12-57,B:77-121,B:155-209,B:398-534 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 14 | B | e5x51B5 | B:535-623 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e5x51B6 | B:814-850,B:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e5x51B7 | B:624-655,B:675-813 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 17 | C | e5x51C1 | C:41-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | C | e5x51C2 | C:2-40,C:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | D | e5x51D1 | D:4-185 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e5x51E1 | E:1-142 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e5x51E2 | E:143-214 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e5x51F1 | F:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e5x51G1 | G:1-68 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | G | e5x51G2 | G:69-171 | S1 | 2 → 2.1 → 2.1.1 |
| 25 | H | e5x51H1 | H:2-144 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e5x51I1 | I:2-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e5x51I2 | I:50-115 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e5x51J1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e5x51K1 | K:1-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e5x51L1 | L:27-72 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | M | e5x51M1 | M:376-436 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 32 | M | e5x51M2 | M:1134-1244 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 33 | M | e5x51M3 | M:338-375,M:437-520 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 34 | M | e5x51M4 | M:664-872 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 35 | M | e5x51M5 | M:873-1061 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 36 | M | e5x51M6 | M:1062-1104,M:1304-1453 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 37 | M | e5x51M7 | M:521-663 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 38 | M | e5x51M8 | M:1105-1133,M:1245-1303 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 39 | M | e5x51M9 | M:6-337 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 40 | N | e5x51N1 | N:210-397 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 41 | N | e5x51N2 | N:814-850,N:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 42 | N | e5x51N3 | N:1098-1224 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 43 | N | e5x51N4 | N:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 44 | N | e5x51N5 | N:624-655,N:675-813 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 45 | N | e5x51N6 | N:12-57,N:77-121,N:155-209,N:398-534 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 46 | N | e5x51N7 | N:535-623 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 47 | O | e5x51O1 | O:2-40,O:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 48 | O | e5x51O2 | O:41-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 49 | P | e5x51P1 | P:4-185 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 50 | Q | e5x51Q1 | Q:143-214 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 51 | Q | e5x51Q2 | Q:1-142 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 52 | R | e5x51R1 | R:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 53 | S | e5x51S1 | S:69-171 | S1 | 2 → 2.1 → 2.1.1 |
| 54 | S | e5x51S2 | S:1-68 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 55 | T | e5x51T1 | T:2-144 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 56 | U | e5x51U1 | U:50-115 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 57 | U | e5x51U2 | U:2-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 58 | V | e5x51V1 | V:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 59 | W | e5x51W1 | W:1-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 60 | X | e5x51X1 | X:27-72 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors