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PDB 5X51

X-RAY DIFFRACTION7.00 Å0 chains60 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (60)

#ChainDomain IDRangeFamilyClassification
1Ae5x51A1A:521-663RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
2Ae5x51A2A:1062-1104,A:1304-1453RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
3Ae5x51A3A:6-337RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
4Ae5x51A4A:338-375,A:437-520RNA_pol_Rpb1_21 → 1.1 → 1.1.2
5Ae5x51A5A:873-1061RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
6Ae5x51A6A:1134-1244RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
7Ae5x51A7A:664-872RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
8Ae5x51A8A:376-436RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
9Ae5x51A9A:1105-1133,A:1245-13034956.1.1.04956 → 4956.1 → 4956.1.1
10Be5x51B1B:210-397RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
11Be5x51B2B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
12Be5x51B3B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
13Be5x51B4B:12-57,B:77-121,B:155-209,B:398-534RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
14Be5x51B5B:535-623RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
15Be5x51B6B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
16Be5x51B7B:624-655,B:675-8134042.1.1.04042 → 4042.1 → 4042.1.1
17Ce5x51C1C:41-172RNA_pol_A_bac240 → 240.2 → 240.2.1
18Ce5x51C2C:2-40,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
19De5x51D1D:4-185RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ee5x51E1E:1-142RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
21Ee5x51E2E:143-214RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
22Fe5x51F1F:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
23Ge5x51G1G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
24Ge5x51G2G:69-171S12 → 2.1 → 2.1.1
25He5x51H1H:2-144RNA_pol_Rpb82 → 2.1 → 2.1.1
26Ie5x51I1I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
27Ie5x51I2I:50-115TFIIS_C375 → 375.1 → 375.1.1
28Je5x51J1J:1-64RNA_pol_N101 → 101.4 → 101.4.1
29Ke5x51K1K:1-113RNA_pol_L_2305 → 305.1 → 305.1.1
30Le5x51L1L:27-72DNA_RNApol_7kD375 → 375.1 → 375.1.1
31Me5x51M1M:376-436RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
32Me5x51M2M:1134-1244RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
33Me5x51M3M:338-375,M:437-520RNA_pol_Rpb1_21 → 1.1 → 1.1.2
34Me5x51M4M:664-872RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
35Me5x51M5M:873-1061RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
36Me5x51M6M:1062-1104,M:1304-1453RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
37Me5x51M7M:521-663RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
38Me5x51M8M:1105-1133,M:1245-13034956.1.1.04956 → 4956.1 → 4956.1.1
39Me5x51M9M:6-337RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
40Ne5x51N1N:210-397RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
41Ne5x51N2N:814-850,N:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
42Ne5x51N3N:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
43Ne5x51N4N:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
44Ne5x51N5N:624-655,N:675-8134042.1.1.04042 → 4042.1 → 4042.1.1
45Ne5x51N6N:12-57,N:77-121,N:155-209,N:398-534RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
46Ne5x51N7N:535-623RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
47Oe5x51O1O:2-40,O:173-268RNA_pol_L305 → 305.1 → 305.1.1
48Oe5x51O2O:41-172RNA_pol_A_bac240 → 240.2 → 240.2.1
49Pe5x51P1P:4-185RNA_pol_Rpb4102 → 102.1 → 102.1.1
50Qe5x51Q1Q:143-214RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
51Qe5x51Q2Q:1-142RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
52Re5x51R1R:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
53Se5x51S1S:69-171S12 → 2.1 → 2.1.1
54Se5x51S2S:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
55Te5x51T1T:2-144RNA_pol_Rpb82 → 2.1 → 2.1.1
56Ue5x51U1U:50-115TFIIS_C375 → 375.1 → 375.1.1
57Ue5x51U2U:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
58Ve5x51V1V:1-64RNA_pol_N101 → 101.4 → 101.4.1
59We5x51W1W:1-113RNA_pol_L_2305 → 305.1 → 305.1.1
60Xe5x51X1X:27-72DNA_RNApol_7kD375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors