ECODEvolutionary Classification of Protein Domains

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PDB 5XLR

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e5xlrA1(A:33-295)e5xlrA2(A:296-315,A:516-676)e5xlrA3(A:316-515)e5xlrA4(A:677-809,A:830-1120)

Chain Bview chain

4 domains

e5xlrB1(B:316-515)e5xlrB2(B:33-295)e5xlrB3(B:296-315,B:516-676)e5xlrB4(B:677-809,B:830-1120)

Chain Cview chain

4 domains

e5xlrC1(C:316-515)e5xlrC2(C:33-295)e5xlrC3(C:677-809,C:830-1120)e5xlrC4(C:296-315,C:516-676)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5xlrA1	A:33-295	bCoV_S1_N	10 → 10.1 → 10.1.1
2	A	e5xlrA2	A:296-315,A:516-676	CoV_S1_C	1043 → 1043.1 → 1043.1.1
3	A	e5xlrA3	A:316-515	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
4	A	e5xlrA4	A:677-809,A:830-1120	CoV_S2	1042 → 1042.1 → 1042.1.1
5	B	e5xlrB1	B:316-515	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
6	B	e5xlrB2	B:33-295	bCoV_S1_N	10 → 10.1 → 10.1.1
7	B	e5xlrB3	B:296-315,B:516-676	CoV_S1_C	1043 → 1043.1 → 1043.1.1
8	B	e5xlrB4	B:677-809,B:830-1120	CoV_S2	1042 → 1042.1 → 1042.1.1
9	C	e5xlrC1	C:316-515	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e5xlrC2	C:33-295	bCoV_S1_N	10 → 10.1 → 10.1.1
11	C	e5xlrC3	C:677-809,C:830-1120	CoV_S2	1042 → 1042.1 → 1042.1.1
12	C	e5xlrC4	C:296-315,C:516-676	CoV_S1_C	1043 → 1043.1 → 1043.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors