PDB 5YBF
X-RAY DIFFRACTION1.50 Å0 chains12 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsAll Domains (12)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5ybfA1 | A:413-518,A:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
| 2 | A | e5ybfA2 | A:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 3 | B | e5ybfB1 | B:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 4 | B | e5ybfB2 | B:413-518,B:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
| 5 | C | e5ybfC1 | C:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 6 | C | e5ybfC2 | C:413-518,C:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
| 7 | D | e5ybfD1 | D:413-518,D:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
| 8 | D | e5ybfD2 | D:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 9 | E | e5ybfE1 | E:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 10 | E | e5ybfE2 | E:413-518,E:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
| 11 | F | e5ybfF1 | F:519-751 | 7523.1.1.0 | 7523 → 7523.1 → 7523.1.1 |
| 12 | F | e5ybfF2 | F:413-518,F:752-795 | Lig_chan-Glu_bd | 7523 → 7523.1 → 7523.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors