PDB 5YKD
X-RAY DIFFRACTION2.17 Å0 chains8 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsAll Domains (8)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5ykdA1 | A:54-391 | Amidohydro_1 | 2002 → 2002.1 → 2002.1.1 |
| 2 | A | e5ykdA2 | A:2-53,A:386-479 | 65.1.1.0 | 65 → 65.1 → 65.1.1 |
| 3 | B | e5ykdB1 | B:2-53,B:386-479 | 65.1.1.0 | 65 → 65.1 → 65.1.1 |
| 4 | B | e5ykdB2 | B:54-391 | Amidohydro_1 | 2002 → 2002.1 → 2002.1.1 |
| 5 | C | e5ykdC1 | C:54-391 | Amidohydro_1 | 2002 → 2002.1 → 2002.1.1 |
| 6 | C | e5ykdC2 | C:2-53,C:386-479 | 65.1.1.0 | 65 → 65.1 → 65.1.1 |
| 7 | D | e5ykdD1 | D:2-53,D:386-479 | 65.1.1.0 | 65 → 65.1 → 65.1.1 |
| 8 | D | e5ykdD2 | D:54-391 | Amidohydro_1 | 2002 → 2002.1 → 2002.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors