PDB 5YLZ
ELECTRON MICROSCOPY0 chains53 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
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1 domainChain Aview chain
5 domainsChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
5 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
1 domainChain Iview chain
1 domainChain jview chain
1 domainChain Jview chain
2 domainsChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
2 domainsChain nview chain
1 domainChain Nview chain
2 domainsChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain qview chain
2 domainsChain rview chain
2 domainsChain Rview chain
1 domainChain sview chain
2 domainsChain Sview chain
1 domainChain tview chain
2 domainsChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainAll Domains (53)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5ylza1 | a:4-55,a:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e5ylzA1 | A:127-884 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e5ylzA2 | A:1575-1577,A:1599-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 4 | A | e5ylzA3 | A:1829-2085 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 5 | A | e5ylzA4 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 6 | A | e5ylzA5 | A:885-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 7 | b | e5ylzb1 | b:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | c | e5ylzc1 | c:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | C | e5ylzC1 | C:102-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 10 | C | e5ylzC2 | C:440-510,C:530-589 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 11 | C | e5ylzC3 | C:859-975 | EFG_C | 304 → 304.24 → 304.24.1 |
| 12 | C | e5ylzC4 | C:590-674 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 13 | C | e5ylzC5 | C:675-858 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 14 | d | e5ylzd1 | d:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | e | e5ylze1 | e:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | f | e5ylzf1 | f:1-48,f:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | g | e5ylzg1 | g:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | h | e5ylzh1 | h:6-53,h:77-102 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | H | e5ylzH1 | H:156-819 | HAT_Syf1_M, HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 20 | i | e5ylzi1 | i:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | I | e5ylzI1 | I:36-275,I:295-564,I:589-622 | HAT, Suf, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 22 | j | e5ylzj1 | j:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | J | e5ylzJ1 | J:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 24 | J | e5ylzJ2 | J:62-109,J:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 25 | k | e5ylzk1 | k:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | l | e5ylzl1 | l:4-84 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | L | e5ylzL1 | L:1-157 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 28 | m | e5ylzm1 | m:1-48,m:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | M | e5ylzM1 | M:3-126 | STL11_N | 376 → 376.1 → 376.1.3 |
| 30 | M | e5ylzM2 | M:202-264,M:288-296 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 31 | n | e5ylzn1 | n:44-108 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | N | e5ylzN1 | N:130-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 33 | N | e5ylzN2 | N:1-129 | Torus | 906 → 906.1 → 906.1.1 |
| 34 | o | e5ylzo1 | o:1-162 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 35 | O | e5ylzO1 | O:111-447 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 36 | p | e5ylzp1 | p:29-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
| 37 | q | e5ylzq1 | q:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 38 | q | e5ylzq2 | q:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 39 | r | e5ylzr1 | r:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 40 | r | e5ylzr2 | r:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 41 | R | e5ylzR1 | R:2-28 | 6026.1.1.0 | 6026 → 6026.1 → 6026.1.1 |
| 42 | s | e5ylzs1 | s:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 43 | s | e5ylzs2 | s:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 44 | S | e5ylzS1 | S:279-485 | MA3 | 109 → 109.4 → 109.4.1 |
| 45 | t | e5ylzt1 | t:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 46 | t | e5ylzt2 | t:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 47 | T | e5ylzT1 | T:104-454 | WD40 | 5 → 5.1 → 5.1.4 |
| 48 | U | e5ylzU1 | U:80-197,U:218-247 | Prp18 | 544 → 544.1 → 544.1.1 |
| 49 | V | e5ylzV1 | V:246-342 | Slu7 | 7101 → 7101.1 → 7101.1.1 |
| 50 | W | e5ylzW1 | W:834-1013 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 51 | W | e5ylzW2 | W:429-657 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 52 | W | e5ylzW3 | W:1014-1107 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 53 | W | e5ylzW4 | W:658-833 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors