PDB 5ZWM
ELECTRON MICROSCOPY0 chains79 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (79)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e5zwm11 | 1:156-971 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 2 | 3 | e5zwm31 | 3:852-890,3:918-1231 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 3 | 3 | e5zwm32 | 3:1232-1261,3:1298-1361 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 4 | 3 | e5zwm33 | 3:56-299,3:324-451,3:472-483 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 5 | 3 | e5zwm34 | 3:452-784,3:815-851 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 6 | 4 | e5zwm41 | 4:9-86 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 7 | 4 | e5zwm42 | 4:106-203 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 8 | 5 | e5zwm51 | 5:28-43,5:71-83 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 9 | 5 | e5zwm52 | 5:21-27,5:55-70 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 10 | 5 | e5zwm53 | 5:2-18,5:42-54,5:82-104 | PHF5 | 377 → 377.1 → 377.1.1 |
| 11 | 6 | e5zwm61 | 6:1-84 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 12 | a | e5zwma1 | a:8-53,a:77-103 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | A | e5zwmA1 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 14 | A | e5zwmA2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 15 | A | e5zwmA3 | A:1575-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 16 | A | e5zwmA4 | A:1829-2085 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 17 | A | e5zwmA5 | A:2150-2401 | PROCT | 2492 → 2492.1 → 2492.1.1 |
| 18 | A | e5zwmA6 | A:131-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 19 | b | e5zwmb1 | b:1-47,b:71-109 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | c | e5zwmc1 | c:20-110 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | C | e5zwmC1 | C:675-858 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 22 | C | e5zwmC2 | C:588-674 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 23 | C | e5zwmC3 | C:464-510,C:530-587 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 24 | C | e5zwmC4 | C:859-975 | EFG_C | 304 → 304.24 → 304.24.1 |
| 25 | C | e5zwmC5 | C:102-463 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 26 | d | e5zwmd1 | d:5-83 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | D | e5zwmD1 | D:1741-1858 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 28 | D | e5zwmD2 | D:1992-2049 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 29 | D | e5zwmD3 | D:1859-1991 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 30 | D | e5zwmD4 | D:1011-1142 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 31 | D | e5zwmD5 | D:906-1010 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 32 | D | e5zwmD6 | D:701-905 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 33 | D | e5zwmD7 | D:1199-1333 | Sec63 | 11 → 11.1 → 11.1.1 |
| 34 | D | e5zwmD8 | D:1334-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 35 | D | e5zwmD9 | D:1542-1740 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 36 | D | e5zwmD10 | D:447-700 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 37 | D | e5zwmD11 | D:1143-1198 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 38 | D | e5zwmD12 | D:2050-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 39 | e | e5zwme1 | e:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | E | e5zwmE1 | E:3-141 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 41 | f | e5zwmf1 | f:11-83 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | g | e5zwmg1 | g:1-76 | LSM | 4 → 4.1 → 4.1.1 |
| 43 | h | e5zwmh1 | h:6-55,h:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | i | e5zwmi1 | i:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | j | e5zwmj1 | j:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | J | e5zwmJ1 | J:332-466 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 47 | J | e5zwmJ2 | J:140-174,J:217-331 | PRP3 | 1040 → 1040.1 → 1040.1.1 |
| 48 | k | e5zwmk1 | k:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | K | e5zwmK1 | K:109-465 | WD40 | 5 → 5.1 → 5.1.4 |
| 50 | l | e5zwml1 | l:4-84 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | L | e5zwmL1 | L:225-348 | Nop | 102 → 102.1 → 102.1.4 |
| 52 | L | e5zwmL2 | L:39-224 | Nop | 606 → 606.1 → 606.1.1 |
| 53 | L | e5zwmL3 | L:349-462 | Prp31_C | 1039 → 1039.1 → 1039.1.1 |
| 54 | m | e5zwmm1 | m:1-48,m:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 55 | M | e5zwmM1 | M:1-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 56 | n | e5zwmn1 | n:44-108 | LSM | 4 → 4.1 → 4.1.1 |
| 57 | N | e5zwmN1 | N:155-178,N:211-899 | PF29376 | 109 → 109.4 → 109.4.1 |
| 58 | o | e5zwmo1 | o:1-162 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 59 | p | e5zwmp1 | p:29-103 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 60 | P | e5zwmP1 | P:12-54,P:76-102 | LSM | 4 → 4.1 → 4.1.1 |
| 61 | q | e5zwmq1 | q:1-92 | LSM | 4 → 4.1 → 4.1.1 |
| 62 | Q | e5zwmQ1 | Q:1-48,Q:78-146 | LSM | 4 → 4.1 → 4.1.1 |
| 63 | r | e5zwmr1 | r:3-79 | LSM | 4 → 4.1 → 4.1.1 |
| 64 | R | e5zwmR1 | R:17-108 | LSM | 4 → 4.1 → 4.1.1 |
| 65 | s | e5zwms1 | s:1-88 | LSM | 4 → 4.1 → 4.1.1 |
| 66 | S | e5zwmS1 | S:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 67 | t | e5zwmt1 | t:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 68 | T | e5zwmT1 | T:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 69 | u | e5zwmu1 | u:1-378 | 3403.1.1.0 | 3403 → 3403.1 → 3403.1.1 |
| 70 | U | e5zwmU1 | U:12-84 | LSM | 4 → 4.1 → 4.1.1 |
| 71 | v | e5zwmv1 | v:34-105 | zf-met | 386 → 386.1 → 386.1.1 |
| 72 | v | e5zwmv2 | v:149-253 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 73 | V | e5zwmV1 | V:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 74 | w | e5zwmw1 | w:89-228 | Surp | 574 → 574.1 → 574.1.1 |
| 75 | x | e5zwmx1 | x:11-84 | LSM | 4 → 4.1 → 4.1.1 |
| 76 | X | e5zwmX1 | X:2-129 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 77 | y | e5zwmy1 | y:26-105 | LSM | 4 → 4.1 → 4.1.1 |
| 78 | z | e5zwmz1 | z:3-67 | LSM | 4 → 4.1 → 4.1.1 |
| 79 | Z | e5zwmZ1 | Z:28-204 | FHA | 73 → 73.1 → 73.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors