PDB 6AHD
ELECTRON MICROSCOPY0 chains82 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain 1view chain
1 domainChain 3view chain
4 domainsChain 4view chain
1 domainChain 5view chain
1 domainChain 6view chain
1 domainChain 7view chain
1 domainChain 8view chain
1 domainChain aview chain
1 domainChain Aview chain
6 domainsChain A0view chain
1 domainChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
5 domainsChain dview chain
1 domainChain Dview chain
12 domainsChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain iview chain
1 domainChain jview chain
1 domainChain Jview chain
2 domainsChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain Pview chain
1 domainChain qview chain
1 domainChain Qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain sview chain
1 domainChain Sview chain
1 domainChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
1 domainChain vview chain
1 domainChain Vview chain
1 domainChain wview chain
1 domainChain Wview chain
1 domainChain xview chain
1 domainChain Xview chain
1 domainChain yview chain
1 domainChain Yview chain
2 domainsChain zview chain
1 domainChain Zview chain
1 domainAll Domains (82)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e6ahd11 | 1:463-485,1:487-1304 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 2 | 3 | e6ahd31 | 3:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 3 | 3 | e6ahd32 | 3:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 4 | 3 | e6ahd33 | 3:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 5 | 3 | e6ahd34 | 3:404-441,3:773-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 6 | 4 | e6ahd41 | 4:12-89 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 7 | 5 | e6ahd51 | 5:12-119 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 8 | 6 | e6ahd61 | 6:7-95 | PHF5 | 377 → 377.1 → 377.1.4 |
| 9 | 7 | e6ahd71 | 7:15-80 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 10 | 8 | e6ahd81 | 8:79-134 | zf-C2H2_jaz | 386 → 386.1 → 386.1.1 |
| 11 | a | e6ahda1 | a:4-89 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | A | e6ahdA1 | A:1755-2026 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 13 | A | e6ahdA2 | A:2067-2316 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 14 | A | e6ahdA3 | A:56-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 15 | A | e6ahdA4 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 16 | A | e6ahdA5 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 17 | A | e6ahdA6 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 18 | A0 | e6ahdA01 | A0:1-73 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 19 | b | e6ahdb1 | b:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | c | e6ahdc1 | c:20-116 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | C | e6ahdC1 | C:829-943 | EFG_C | 304 → 304.24 → 304.24.1 |
| 22 | C | e6ahdC2 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 23 | C | e6ahdC3 | C:112-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 24 | C | e6ahdC4 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 25 | C | e6ahdC5 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 26 | d | e6ahdd1 | d:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | D | e6ahdD1 | D:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 28 | D | e6ahdD2 | D:683-887 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 29 | D | e6ahdD3 | D:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 30 | D | e6ahdD4 | D:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 31 | D | e6ahdD5 | D:888-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 32 | D | e6ahdD6 | D:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 33 | D | e6ahdD7 | D:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 34 | D | e6ahdD8 | D:427-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 35 | D | e6ahdD9 | D:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 36 | D | e6ahdD10 | D:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 37 | D | e6ahdD11 | D:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 38 | D | e6ahdD12 | D:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 39 | e | e6ahde1 | e:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | E | e6ahdE1 | E:58-356 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 41 | f | e6ahdf1 | f:3-76 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | g | e6ahdg1 | g:3-85 | LSM | 4 → 4.1 → 4.1.1 |
| 43 | h | e6ahdh1 | h:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | i | e6ahdi1 | i:4-89 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | j | e6ahdj1 | j:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | J | e6ahdJ1 | J:542-672 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 47 | J | e6ahdJ2 | J:436-541 | PRP3 | 1040 → 1040.1 → 1040.1.1 |
| 48 | k | e6ahdk1 | k:20-116 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | K | e6ahdK1 | K:164-522 | WD40 | 5 → 5.1 → 5.1.4 |
| 50 | l | e6ahdl1 | l:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | L | e6ahdL1 | L:52-80,L:85-216 | Nop | 606 → 606.1 → 606.1.1 |
| 52 | L | e6ahdL2 | L:217-334 | Nop | 102 → 102.1 → 102.1.4 |
| 53 | L | e6ahdL3 | L:335-432 | Prp31_C | 1039 → 1039.1 → 1039.1.1 |
| 54 | m | e6ahdm1 | m:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 55 | M | e6ahdM1 | M:5-128 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 56 | n | e6ahdn1 | n:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 57 | N | e6ahdN1 | N:292-937 | TPR_14, TPR_16, TPR_19, PF29376 | 109 → 109.4 → 109.4.1 |
| 58 | o | e6ahdo1 | o:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 59 | O | e6ahdO1 | O:2-142 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 60 | p | e6ahdp1 | p:3-96 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 61 | P | e6ahdP1 | P:26-114 | LSM | 4 → 4.1 → 4.1.1 |
| 62 | q | e6ahdq1 | q:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 63 | Q | e6ahdQ1 | Q:4-74 | LSM | 4 → 4.1 → 4.1.1 |
| 64 | r | e6ahdr1 | r:16-98 | LSM | 4 → 4.1 → 4.1.1 |
| 65 | R | e6ahdR1 | R:15-92 | LSM | 4 → 4.1 → 4.1.1 |
| 66 | s | e6ahds1 | s:1-80 | LSM | 4 → 4.1 → 4.1.1 |
| 67 | S | e6ahdS1 | S:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 68 | t | e6ahdt1 | t:10-85 | LSM | 4 → 4.1 → 4.1.1 |
| 69 | T | e6ahdT1 | T:4-74 | LSM | 4 → 4.1 → 4.1.1 |
| 70 | u | e6ahdu1 | u:160-302 | Surp,PRP21_like_P | 574 → 574.1 → 574.1.1 |
| 71 | U | e6ahdU1 | U:7-83 | LSM | 4 → 4.1 → 4.1.1 |
| 72 | v | e6ahdv1 | v:118-223 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 73 | V | e6ahdV1 | V:2-83 | LSM | 4 → 4.1 → 4.1.1 |
| 74 | w | e6ahdw1 | w:2-353 | 130.1.1.0 | 130 → 130.1 → 130.1.1 |
| 75 | W | e6ahdW1 | W:9-177 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 76 | x | e6ahdx1 | x:7-76 | LSM | 4 → 4.1 → 4.1.1 |
| 77 | X | e6ahdX1 | X:8-82 | zf-U1 | 386 → 386.1 → 386.1.1 |
| 78 | y | e6ahdy1 | y:11-87 | LSM | 4 → 4.1 → 4.1.1 |
| 79 | Y | e6ahdY1 | Y:133-154,Y:204-513 | WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st | 5 → 5.1 → 5.1.4 |
| 80 | Y | e6ahdY2 | Y:5-132 | LisH_TPL | 558 → 558.1 → 558.1.1 |
| 81 | z | e6ahdz1 | z:4-73 | LSM | 4 → 4.1 → 4.1.1 |
| 82 | Z | e6ahdZ1 | Z:1-176 | PRP38 | 109 → 109.50 → 109.50.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors