PDB 6C06
ELECTRON MICROSCOPY0 chains25 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
9 domainsChain Eview chain
1 domainChain Jview chain
1 domainAll Domains (25)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6c06A1 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e6c06A2 | A:1-47,A:170-226 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e6c06B1 | B:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e6c06B2 | B:1-47,B:170-237 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e6c06C1 | C:182-376 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 6 | C | e6c06C2 | C:710-747,C:880-1035 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | C | e6c06C3 | C:748-879 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 8 | C | e6c06C4 | C:30-181,C:377-502 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | C | e6c06C5 | C:503-638 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 10 | C | e6c06C6 | C:639-709 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 11 | C | e6c06C7 | C:1036-1140 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 12 | D | e6c06D1 | D:171-231,D:634-639 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e6c06D2 | D:232-258 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e6c06D3 | D:307-415 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 15 | D | e6c06D4 | D:416-578 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 16 | D | e6c06D5 | D:579-633,D:640-734 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e6c06D6 | D:735-886,D:888-901 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 18 | D | e6c06D7 | D:887-887,D:890-1011 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 19 | D | e6c06D8 | D:1043-1116 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 20 | D | e6c06D9 | D:1117-1279 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 21 | E | e6c06E1 | E:27-109 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 22 | F | e6c06F1 | F:364-420 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 23 | F | e6c06F2 | F:202-363 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 24 | F | e6c06F3 | F:392-394,F:421-527 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 25 | J | e6c06J1 | J:2-79 | RbpA | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors