PDB 6CDE
ELECTRON MICROSCOPY0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 1view chain
1 domainChain 3view chain
1 domainChain 4view chain
1 domainChain 5view chain
1 domainChain 6view chain
1 domainChain 7view chain
1 domainChain 8view chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain hview chain
1 domainChain Hview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain qview chain
1 domainChain Qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e6cde11 | 1:512-547,1:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 2 | 2 | e6cde21 | 2:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 3 | 2 | e6cde22 | 2:31-119,2:203-255,2:474-505 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 4 | 2 | e6cde23 | 2:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 5 | 3 | e6cde31 | 3:4-111 | V-set | 11 → 11.1 → 11.1.1 |
| 6 | 4 | e6cde41 | 4:1-108 | V-set | 11 → 11.1 → 11.1.1 |
| 7 | 5 | e6cde51 | 5:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 8 | 6 | e6cde61 | 6:1-103 | V-set | 11 → 11.1 → 11.1.1 |
| 9 | 7 | e6cde71 | 7:1-132 | V-set | 11 → 11.1 → 11.1.1 |
| 10 | 8 | e6cde81 | 8:6-109 | V-set | 11 → 11.1 → 11.1.1 |
| 11 | c | e6cdec1 | c:31-119,c:203-255,c:474-505 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 12 | c | e6cdec2 | c:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 13 | c | e6cdec3 | c:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 14 | C | e6cdeC1 | C:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 15 | C | e6cdeC2 | C:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 16 | C | e6cdeC3 | C:31-119,C:203-255,C:474-505 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 17 | d | e6cded1 | d:512-547,d:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 18 | D | e6cdeD1 | D:512-547,D:569-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 19 | h | e6cdeh1 | h:4-111 | V-set | 11 → 11.1 → 11.1.1 |
| 20 | H | e6cdeH1 | H:4-111 | V-set | 11 → 11.1 → 11.1.1 |
| 21 | l | e6cdel1 | l:1-108 | V-set | 11 → 11.1 → 11.1.1 |
| 22 | L | e6cdeL1 | L:1-108 | V-set | 11 → 11.1 → 11.1.1 |
| 23 | m | e6cdem1 | m:1-132 | V-set | 11 → 11.1 → 11.1.1 |
| 24 | M | e6cdeM1 | M:1-132 | V-set | 11 → 11.1 → 11.1.1 |
| 25 | n | e6cden1 | n:6-109 | V-set | 11 → 11.1 → 11.1.1 |
| 26 | N | e6cdeN1 | N:6-109 | V-set | 11 → 11.1 → 11.1.1 |
| 27 | q | e6cdeq1 | q:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 28 | Q | e6cdeQ1 | Q:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 29 | r | e6cder1 | r:1-103 | V-set | 11 → 11.1 → 11.1.1 |
| 30 | R | e6cdeR1 | R:1-103 | V-set | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors