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PDB 6CNF

ELECTRON MICROSCOPY0 chains45 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (45)

#ChainDomain IDRangeFamilyClassification
1Ae6cnfA1A:1085-1136,A:1318-1460RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
2Ae6cnfA2A:552-710RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
3Ae6cnfA3A:2-3584246.1.1.04246 → 4246.1 → 4246.1.1
4Ae6cnfA4A:1137-1164,A:1272-13174956.1.1.04956 → 4956.1 → 4956.1.1
5Ae6cnfA5A:1165-12714955.1.1.04955 → 4955.1 → 4955.1.1
6Ae6cnfA6A:920-10844957.1.1.04957 → 4957.1 → 4957.1.1
7Ae6cnfA7A:711-919RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
8Ae6cnfA8A:403-465RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
9Ae6cnfA9A:359-402,A:466-551RNA_pol_Rpb1_21 → 1.1 → 1.1.2
10Be6cnfB1B:517-605RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
11Be6cnfB2B:606-7454042.1.1.04042 → 4042.1 → 4042.1.1
12Be6cnfB3B:201-375RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
13Be6cnfB4B:36-200,B:376-516RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
14Be6cnfB5B:1030-1149RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
15Be6cnfB6B:783-906RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
16Be6cnfB7B:746-782,B:907-1029RNA_pol_Rpb2_61 → 1.1 → 1.1.2
17Ce6cnfC1C:1-75,C:222-335RNA_pol_L305 → 305.1 → 305.1.1
18Ce6cnfC2C:76-221RNA_pol_A_bac240 → 240.2 → 240.2.1
19De6cnfD1D:1-71,D:98-161RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ee6cnfE1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
21Ee6cnfE2E:1-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
22Fe6cnfF1F:71-153RNA_pol_Rpb6152 → 152.1 → 152.1.1
23Ge6cnfG1G:2-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
24Ge6cnfG2G:79-166,G:189-212RNA_pol_Rbc252 → 2.1 → 2.1.1
25He6cnfH1H:1-146RNA_pol_Rpb82 → 2.1 → 2.1.1
26Ie6cnfI1I:1-42RNA_POL_M_15KD375 → 375.1 → 375.1.1
27Je6cnfJ1J:1-67RNA_pol_N101 → 101.4 → 101.4.1
28Ke6cnfK1K:42-142RNA_pol_L_2305 → 305.1 → 305.1.1
29Le6cnfL1L:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
30Me6cnfM1M:71-196,M:225-262RPC559 → 59.1 → 59.1.1
31Ne6cnfN1N:274-320,N:360-422RNA_pol_Rpc459 → 59.1 → 59.1.1
32Oe6cnfO1O:480-567POLR3C_WHD101 → 101.1 → 101.1.2
33Oe6cnfO2O:31-129HTH_9101 → 101.1 → 101.1.2
34Oe6cnfO3O:283-371,O:449-479RNA_pol_Rpc82101 → 101.1 → 101.1.2
35Oe6cnfO4O:130-282RNA_pol_Rpc82101 → 101.1 → 101.1.2
36Oe6cnfO5O:568-654RPC3_helical192 → 192.24 → 192.24.1
37Pe6cnfP1P:166-271,P:292-316RNA_pol_Rpc34101 → 101.1 → 101.1.2
38Pe6cnfP2P:78-165RNA_pol_Rpc34101 → 101.1 → 101.1.2
39Pe6cnfP3P:10-77RNA_pol_Rpc34101 → 101.1 → 101.1.2
40Re6cnfR1R:387-483,R:576-611TBP331 → 331.1 → 331.1.1
41Re6cnfR2R:1-41TF_Zn_Ribbon375 → 375.1 → 375.1.1
42Re6cnfR3R:483-566TBP331 → 331.1 → 331.1.1
43Re6cnfR4R:176-297TFIIB101 → 101.1 → 101.1.10
44Re6cnfR5R:72-175TFIIB101 → 101.1 → 101.1.10
45Re6cnfR6R:612-650BRF1331 → 331.1 → 331.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors