PDB 6DCF
X-RAY DIFFRACTION3.45 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
6 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Jview chain
1 domainAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6dcfA1 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e6dcfA2 | A:2-47,A:170-220 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e6dcfB1 | B:2-47,B:170-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e6dcfB2 | B:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e6dcfC1 | C:701-737,C:864-1026 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 6 | C | e6dcfC2 | C:23-172,C:364-493 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 7 | C | e6dcfC3 | C:1027-1139 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e6dcfC4 | C:494-531,C:570-629 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 9 | C | e6dcfC5 | C:738-869 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | C | e6dcfC6 | C:630-700 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 11 | D | e6dcfD1 | D:3-143,D:223-395 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 12 | E | e6dcfE1 | E:25-106 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 13 | F | e6dcfF1 | F:302-358 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 14 | F | e6dcfF2 | F:330-332,F:359-465 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 15 | F | e6dcfF3 | F:164-301 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 16 | J | e6dcfJ1 | J:26-109 | RbpA | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors