PDB 6DNC
ELECTRON MICROSCOPY0 chains64 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain AAview chain
1 domainChain ABview chain
1 domainChain BAview chain
1 domainChain BBview chain
1 domainChain CAview chain
1 domainChain CBview chain
1 domainChain DAview chain
1 domainChain DBview chain
1 domainChain Eview chain
2 domainsChain EAview chain
1 domainChain EBview chain
1 domainChain Fview chain
2 domainsChain FAview chain
1 domainChain FBview chain
1 domainChain Gview chain
1 domainChain GAview chain
1 domainChain GBview chain
1 domainChain Hview chain
1 domainChain HAview chain
1 domainChain HBview chain
1 domainChain Iview chain
1 domainChain IAview chain
1 domainChain Jview chain
2 domainsChain JAview chain
1 domainChain Kview chain
2 domainsChain Lview chain
1 domainChain Mview chain
2 domainsChain MAview chain
4 domainsChain Nview chain
1 domainChain Oview chain
1 domainChain OAview chain
1 domainChain Pview chain
1 domainChain PAview chain
2 domainsChain Qview chain
1 domainChain QAview chain
1 domainChain Rview chain
1 domainChain RAview chain
2 domainsChain Sview chain
1 domainChain SAview chain
1 domainChain Tview chain
1 domainChain TAview chain
1 domainChain Uview chain
1 domainChain UAview chain
2 domainsChain Vview chain
1 domainChain VAview chain
1 domainChain Wview chain
1 domainChain WAview chain
1 domainChain Xview chain
1 domainChain XAview chain
1 domainChain Yview chain
1 domainChain YAview chain
1 domainChain Zview chain
1 domainChain ZAview chain
1 domainAll Domains (64)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AA | e6dncAA1 | AA:7-81 | 325.1.8.0 | 325 → 325.1 → 325.1.8 |
| 2 | AB | e6dncAB1 | AB:1-101 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 3 | BA | e6dncBA1 | BA:1-77 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 4 | BB | e6dncBB1 | BB:1-88 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 5 | CA | e6dncCA1 | CA:1-63 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 6 | CB | e6dncCB1 | CB:1-82 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 7 | DA | e6dncDA1 | DA:1-58 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 8 | DB | e6dncDB1 | DB:3-82 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 9 | E | e6dncE1 | E:6-68,E:160-225 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 10 | E | e6dncE2 | E:69-159 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 11 | EA | e6dncEA1 | EA:1-66 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 12 | EB | e6dncEB1 | EB:9-73 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 13 | F | e6dncF1 | F:1-124 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 14 | F | e6dncF2 | F:125-271 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 15 | FA | e6dncFA1 | FA:1-56 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 16 | FB | e6dncFB1 | FB:2-80 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 17 | G | e6dncG1 | G:1-209 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 18 | GA | e6dncGA1 | GA:3-52 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 19 | GB | e6dncGB1 | GB:2-86 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 20 | H | e6dncH1 | H:1-201 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 21 | HA | e6dncHA1 | HA:1-46 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 22 | HB | e6dncHB1 | HB:3-67 | Ribosomal_S21 | 3666 → 3666.1 → 3666.1.1 |
| 23 | I | e6dncI1 | I:1-177 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 24 | IA | e6dncIA1 | IA:1-64 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 25 | J | e6dncJ1 | J:1-81 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 26 | J | e6dncJ2 | J:82-176 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 27 | JA | e6dncJA1 | JA:1-38 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 28 | K | e6dncK1 | K:1-55 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 29 | K | e6dncK2 | K:55-149 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 30 | L | e6dncL1 | L:1-131 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 31 | M | e6dncM1 | M:72-141 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 32 | M | e6dncM2 | M:1-71 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 33 | MA | e6dncMA1 | MA:6-65,MA:67-98 | PCRF | 4006 → 4006.1 → 4006.1.1 |
| 34 | MA | e6dncMA2 | MA:297-356 | 330.3.1.0 | 330 → 330.3 → 330.3.1 |
| 35 | MA | e6dncMA3 | MA:102-210 | PCRF | 304 → 304.116 → 304.116.1 |
| 36 | MA | e6dncMA4 | MA:211-296 | RF-1 | 330 → 330.3 → 330.3.1 |
| 37 | N | e6dncN1 | N:1-142 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 38 | O | e6dncO1 | O:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 39 | OA | e6dncOA1 | OA:1-225 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 40 | P | e6dncP1 | P:2-144 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 41 | PA | e6dncPA1 | PA:105-206 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 42 | PA | e6dncPA2 | PA:1-104 | KH_2 | 327 → 327.11 → 327.11.1 |
| 43 | Q | e6dncQ1 | Q:1-136 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 44 | QA | e6dncQA1 | QA:1-205 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 45 | R | e6dncR1 | R:1-120 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 46 | RA | e6dncRA1 | RA:78-165 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 47 | RA | e6dncRA2 | RA:9-77 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 48 | S | e6dncS1 | S:2-117 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 49 | SA | e6dncSA1 | SA:1-100 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 50 | T | e6dncT1 | T:1-114 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 51 | TA | e6dncTA1 | TA:1-151 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 52 | U | e6dncU1 | U:1-117 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 53 | UA | e6dncUA1 | UA:64-129 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 54 | UA | e6dncUA2 | UA:1-63 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 55 | V | e6dncV1 | V:1-103 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 56 | VA | e6dncVA1 | VA:3-129 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 57 | W | e6dncW1 | W:1-110 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 58 | WA | e6dncWA1 | WA:5-102 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 59 | X | e6dncX1 | X:1-93 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 60 | XA | e6dncXA1 | XA:12-127 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 61 | Y | e6dncY1 | Y:1-102 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 62 | YA | e6dncYA1 | YA:1-123 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 63 | Z | e6dncZ1 | Z:1-94 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 64 | ZA | e6dncZA1 | ZA:1-114 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors