PDB 6DRD
ELECTRON MICROSCOPY0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
7 domainsChain Bview chain
6 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6drdA1 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 2 | A | e6drdA2 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 3 | A | e6drdA3 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 4 | A | e6drdA4 | A:1152-1308 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 5 | A | e6drdA5 | A:364-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e6drdA6 | A:1083-1135,A:1361-1415,A:1469-1484 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e6drdA7 | A:1136-1151,A:1309-1360 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 8 | B | e6drdB1 | B:16-200,B:392-527 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | B | e6drdB2 | B:199-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 10 | B | e6drdB3 | B:618-767 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 11 | B | e6drdB4 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | B | e6drdB5 | B:528-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | B | e6drdB6 | B:768-805,B:930-1059 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | C | e6drdC1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 15 | C | e6drdC2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 16 | D | e6drdD1 | D:14-141 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 17 | E | e6drdE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 18 | E | e6drdE2 | E:6-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 19 | F | e6drdF1 | F:51-126 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 20 | G | e6drdG1 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 21 | G | e6drdG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 22 | H | e6drdH1 | H:3-148 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 23 | I | e6drdI1 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 24 | I | e6drdI2 | I:12-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 25 | J | e6drdJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 26 | K | e6drdK1 | K:2-112 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 27 | L | e6drdL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors