PDB 6EM1
ELECTRON MICROSCOPY0 chains42 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 3view chain
1 domainChain 4view chain
1 domainChain 5view chain
1 domainChain Aview chain
1 domainChain bview chain
2 domainsChain Bview chain
1 domainChain Cview chain
2 domainsChain Dview chain
2 domainsChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain Fview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
2 domainsChain iview chain
1 domainChain jview chain
1 domainChain Kview chain
2 domainsChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain sview chain
1 domainChain Sview chain
2 domainsChain tview chain
1 domainChain uview chain
1 domainChain vview chain
1 domainChain Vview chain
1 domainChain Wview chain
2 domainsChain xview chain
1 domainChain yview chain
1 domainChain Yview chain
1 domainAll Domains (42)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 3 | e6em131 | 3:2-131 | Ribosomal_L28e | 3209 → 3209.1 → 3209.1.1 |
| 2 | 4 | e6em141 | 4:5-185,4:210-247 | Nop52 | 109 → 109.4 → 109.4.1 |
| 3 | 5 | e6em151 | 5:1-76,5:101-416 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 4 | A | e6em1A1 | A:28-191 | Brix | 7502 → 7502.1 → 7502.1.1 |
| 5 | b | e6em1b1 | b:165-347 | MMR_HSR1, NOG1 | 2004 → 2004.1 → 2004.1.1 |
| 6 | b | e6em1b2 | b:1-164 | NOG1_N | 601 → 601.30 → 601.30.1 |
| 7 | B | e6em1B1 | B:12-225,B:269-387 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 8 | C | e6em1C2 | C:270-344 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 9 | C | e6em1C3 | C:2-275 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 10 | D | e6em1D1 | D:267-418 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 11 | D | e6em1D2 | D:419-481 | DUF4217 | 3676 → 3676.1 → 3676.1.1 |
| 12 | e | e6em1e1 | e:4-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 13 | E | e6em1E1 | E:7-109,E:129-176 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 14 | f | e6em1f1 | f:2-107 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 15 | F | e6em1F1 | F:4-244 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 16 | G | e6em1G1 | G:70-233 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 17 | h | e6em1h1 | h:2-120 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 18 | H | e6em1H1 | H:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 19 | H | e6em1H2 | H:86-190 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 20 | i | e6em1i1 | i:27-100 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 21 | j | e6em1j1 | j:15-85 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 22 | K | e6em1K1 | K:106-233 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 23 | K | e6em1K2 | K:31-51,K:73-105,K:234-301 | 898.1.1.0 | 898 → 898.1 → 898.1.1 |
| 24 | L | e6em1L1 | L:22-129 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 25 | m | e6em1m1 | m:434-805 | WD40 | 5 → 5.1 → 5.1.1 |
| 26 | M | e6em1M1 | M:4-137 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 27 | N | e6em1N1 | N:2-69,N:96-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 28 | O | e6em1O1 | O:3-199 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 29 | P | e6em1P1 | P:10-161 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 30 | Q | e6em1Q1 | Q:15-145 | Ribosomal_L27A, Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 31 | s | e6em1s1 | s:177-449 | MMR_HSR1 | 2004 → 2004.1 → 2004.1.1 |
| 32 | S | e6em1S1 | S:3-69 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 33 | S | e6em1S2 | S:70-172 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 34 | t | e6em1t1 | t:53-105,t:127-317 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 35 | u | e6em1u1 | u:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 36 | v | e6em1v1 | v:175-227 | Nop16 | 101 → 101.1 → 101.1.1 |
| 37 | V | e6em1V1 | V:12-137 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 38 | W | e6em1W1 | W:121-211 | RL10P_insert | 3310 → 3310.1 → 3310.1.1 |
| 39 | W | e6em1W2 | W:3-120,W:212-234 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 40 | x | e6em1x1 | x:88-295 | Brix | 7502 → 7502.1 → 7502.1.1 |
| 41 | y | e6em1y1 | y:1-225 | eIF-6 | 232 → 232.1 → 232.1.1 |
| 42 | Y | e6em1Y1 | Y:2-126 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors