PDB 6FF4
ELECTRON MICROSCOPY0 chains34 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
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1 domainChain 7view chain
1 domainChain Aview chain
6 domainsChain Bview chain
5 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Lview chain
2 domainsChain Oview chain
1 domainChain Pview chain
3 domainsChain Qview chain
1 domainChain sview chain
1 domainChain tview chain
1 domainChain uview chain
1 domainChain vview chain
4 domainsChain Vview chain
1 domainChain xview chain
1 domainChain yview chain
1 domainChain Yview chain
1 domainChain zview chain
1 domainAll Domains (34)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e6ff411 | 1:2-123 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 2 | 7 | e6ff471 | 7:1-93 | zf-met | 386 → 386.1 → 386.1.1 |
| 3 | A | e6ff4A1 | A:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 4 | A | e6ff4A2 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 5 | A | e6ff4A3 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 6 | A | e6ff4A4 | A:1755-2016 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 7 | A | e6ff4A5 | A:2067-2316 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 8 | A | e6ff4A6 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 9 | B | e6ff4B1 | B:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 10 | B | e6ff4B2 | B:56-439 | GTP_EFTU,EFTUD2 | 2004 → 2004.1 → 2004.1.1 |
| 11 | B | e6ff4B3 | B:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 12 | B | e6ff4B4 | B:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 13 | B | e6ff4B5 | B:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 14 | D | e6ff4D1 | D:181-500 | WD40 | 5 → 5.1 → 5.1.4 |
| 15 | E | e6ff4E1 | E:273-579 | WD40 | 5 → 5.1 → 5.1.4 |
| 16 | L | e6ff4L1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 17 | L | e6ff4L2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 18 | O | e6ff4O1 | O:215-467 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 19 | P | e6ff4P1 | P:90-220 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 20 | P | e6ff4P2 | P:221-308 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 21 | P | e6ff4P3 | P:15-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 22 | Q | e6ff4Q1 | Q:3-140 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 23 | s | e6ff4s1 | s:2-176 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 24 | t | e6ff4t1 | t:191-226 | zf-CCCH | 906 → 906.1 → 906.1.1 |
| 25 | u | e6ff4u1 | u:398-415,u:463-1304 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 26 | v | e6ff4v1 | v:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 27 | v | e6ff4v2 | v:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 28 | v | e6ff4v3 | v:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 29 | v | e6ff4v4 | v:404-441,v:773-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 30 | V | e6ff4V1 | V:8-166 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 31 | x | e6ff4x1 | x:1-79 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 32 | y | e6ff4y1 | y:2-101 | PHF5 | 377 → 377.1 → 377.1.4 |
| 33 | Y | e6ff4Y1 | Y:32-126 | PWI | 592 → 592.1 → 592.1.1 |
| 34 | z | e6ff4z1 | z:12-112 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors