PDB 6FF7
ELECTRON MICROSCOPY0 chains88 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (88)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e6ff701 | 0:246-367 | FHA | 73 → 73.1 → 73.1.1 |
| 2 | 1 | e6ff711 | 1:2-123 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 3 | 7 | e6ff771 | 7:1-93 | zf-met | 386 → 386.1 → 386.1.1 |
| 4 | 9 | e6ff791 | 9:1-355 | 130.1.1.0 | 130 → 130.1 → 130.1.1 |
| 5 | a | e6ff7a1 | a:26-114 | LSM | 4 → 4.1 → 4.1.1 |
| 6 | A | e6ff7A1 | A:1755-2016 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 7 | A | e6ff7A2 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 8 | A | e6ff7A3 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 9 | A | e6ff7A4 | A:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 10 | A | e6ff7A5 | A:2067-2316 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 11 | A | e6ff7A6 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 12 | b | e6ff7b1 | b:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | B | e6ff7B1 | B:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 14 | B | e6ff7B2 | B:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 15 | B | e6ff7B3 | B:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 16 | B | e6ff7B4 | B:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 17 | B | e6ff7B5 | B:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 18 | c | e6ff7c1 | c:15-92 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | d | e6ff7d1 | d:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | D | e6ff7D1 | D:181-500 | WD40 | 5 → 5.1 → 5.1.4 |
| 21 | e | e6ff7e1 | e:4-91 | LSM | 4 → 4.1 → 4.1.1 |
| 22 | E | e6ff7E1 | E:273-579 | WD40 | 5 → 5.1 → 5.1.4 |
| 23 | f | e6ff7f1 | f:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 24 | F | e6ff7F1 | F:58-356 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 25 | g | e6ff7g1 | g:2-95 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | G | e6ff7G1 | G:68-134,G:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 27 | h | e6ff7h1 | h:19-116 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | H | e6ff7H1 | H:68-134,H:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 29 | i | e6ff7i1 | i:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | I | e6ff7I1 | I:68-134,I:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 31 | j | e6ff7j1 | j:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | J | e6ff7J1 | J:68-134,J:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 33 | k | e6ff7k1 | k:3-76 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | l | e6ff7l1 | l:2-84 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | L | e6ff7L1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 36 | L | e6ff7L2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 37 | m | e6ff7m1 | m:4-87 | LSM | 4 → 4.1 → 4.1.1 |
| 38 | M | e6ff7M1 | M:33-738 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 39 | n | e6ff7n1 | n:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | N | e6ff7N1 | N:12-112 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 41 | o | e6ff7o1 | o:1-82 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 42 | o | e6ff7o2 | o:141-301 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 43 | O | e6ff7O1 | O:215-467 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 44 | p | e6ff7p1 | p:159-272 | Surp | 574 → 574.1 → 574.1.1 |
| 45 | p | e6ff7p2 | p:47-110 | Surp | 574 → 574.1 → 574.1.1 |
| 46 | P | e6ff7P1 | P:90-220 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 47 | P | e6ff7P2 | P:15-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 48 | P | e6ff7P3 | P:221-308 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 49 | q | e6ff7q1 | q:576-751 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 50 | q | e6ff7q2 | q:752-932 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 51 | q | e6ff7q3 | q:402-575 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 52 | q | e6ff7q4 | q:933-1026 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 53 | Q | e6ff7Q1 | Q:3-140 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 54 | r | e6ff7r1 | r:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 55 | r | e6ff7r2 | r:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 56 | r | e6ff7r3 | r:683-887 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 57 | r | e6ff7r4 | r:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 58 | r | e6ff7r5 | r:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 59 | r | e6ff7r6 | r:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 60 | r | e6ff7r7 | r:404-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 61 | r | e6ff7r8 | r:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 62 | r | e6ff7r9 | r:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 63 | r | e6ff7r10 | r:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 64 | r | e6ff7r11 | r:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 65 | r | e6ff7r12 | r:888-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 66 | s | e6ff7s1 | s:2-176 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 67 | t | e6ff7t1 | t:191-226 | zf-CCCH | 906 → 906.1 → 906.1.1 |
| 68 | T | e6ff7T1 | T:149-406 | MIF4G | 109 → 109.4 → 109.4.1 |
| 69 | T | e6ff7T2 | T:442-645 | MA3 | 109 → 109.4 → 109.4.1 |
| 70 | u | e6ff7u1 | u:398-415,u:463-1304 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 71 | U | e6ff7U1 | U:416-492,U:660-706,U:795-1134 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 72 | U | e6ff7U2 | U:1135-1381 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 73 | U | e6ff7U3 | U:493-659 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 74 | U | e6ff7U4 | U:707-753,U:773-794 | Aquarius_N_3rd | 3940 → 3940.1 → 3940.1.1 |
| 75 | U | e6ff7U5 | U:19-415 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 76 | v | e6ff7v1 | v:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 77 | v | e6ff7v2 | v:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 78 | v | e6ff7v3 | v:404-441,v:773-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 79 | v | e6ff7v4 | v:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 80 | V | e6ff7V1 | V:8-166 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 81 | w | e6ff7w1 | w:39-94 | Isy1 | 192 → 192.13 → 192.13.1 |
| 82 | W | e6ff7W1 | W:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 83 | x | e6ff7x1 | x:1-79 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 84 | X | e6ff7X1 | X:6-87 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 85 | X | e6ff7X2 | X:88-99,X:149-225 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 86 | y | e6ff7y1 | y:2-101 | PHF5 | 377 → 377.1 → 377.1.4 |
| 87 | Y | e6ff7Y1 | Y:32-126 | PWI | 592 → 592.1 → 592.1.1 |
| 88 | z | e6ff7z1 | z:12-112 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors