PDB 6FSZ
ELECTRON MICROSCOPY0 chains35 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain AAview chain
2 domainsChain BBview chain
2 domainsChain DDview chain
2 domainsChain EEview chain
2 domainsChain FFview chain
2 domainsChain GGview chain
3 domainsChain HHview chain
3 domainsChain JJview chain
5 domainsChain KKview chain
3 domainsChain LLview chain
1 domainAll Domains (35)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AA | e6fszAA1 | AA:3-186 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 2 | AA | e6fszAA2 | AA:187-301 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 3 | BB | e6fszBB1 | BB:1-152 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 4 | BB | e6fszBB2 | BB:153-244 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 5 | CC | e6fszCC1 | CC:8-99,CC:121-249,CC:270-286 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 6 | CC | e6fszCC2 | CC:287-394 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 7 | DD | e6fszDD1 | DD:1-125 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 8 | DD | e6fszDD2 | DD:126-223 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 9 | EE | e6fszEE1 | EE:181-265 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 10 | EE | e6fszEE2 | EE:-1-180 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 11 | FF | e6fszFF1 | FF:183-248 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 12 | FF | e6fszFF2 | FF:4-22,FF:42-185 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 13 | GG | e6fszGG1 | GG:1-63 | Rrp40_N | 325 → 325.1 → 325.1.8 |
| 14 | GG | e6fszGG2 | GG:152-237 | KH_6 | 327 → 327.11 → 327.11.2 |
| 15 | GG | e6fszGG3 | GG:62-151 | RRP40_S1 | 2 → 2.1 → 2.1.1 |
| 16 | HH | e6fszHH1 | HH:102-196 | RRP4_S1 | 2 → 2.1 → 2.1.1 |
| 17 | HH | e6fszHH2 | HH:196-245,HH:276-356 | KH_6 | 327 → 327.11 → 327.11.2 |
| 18 | HH | e6fszHH3 | HH:2-17,HH:50-101 | ECR1_N | 325 → 325.1 → 325.1.8 |
| 19 | II | e6fszII1 | II:126-162,II:186-291 | EXOSC1 | 2 → 2.1 → 2.1.1 |
| 20 | II | e6fszII2 | II:8-68,II:106-115 | CSL4_N | 325 → 325.1 → 325.1.8 |
| 21 | JJ | e6fszJJ1 | JJ:9-236 | PIN_4 | 2006 → 2006.1 → 2006.1.4 |
| 22 | JJ | e6fszJJ2 | JJ:237-329,JJ:364-399 | Rrp44_CSD1 | 2 → 2.1 → 2.1.1 |
| 23 | JJ | e6fszJJ3 | JJ:911-1001 | Rrp44_S1 | 2 → 2.1 → 2.1.1 |
| 24 | JJ | e6fszJJ4 | JJ:495-910 | RNB | 2 → 2.9 → 2.9.1 |
| 25 | JJ | e6fszJJ5 | JJ:400-494 | OB_Dis3 | 2 → 2.1 → 2.1.1 |
| 26 | KK | e6fszKK01 | KK:1-119,KK:167-170,KK:176-196,KK:207-214,KK:402-405,KK:411,KK:424-430 | PMC2NT | 3910 → 3910.1 → 3910.1.1 |
| 27 | KK | e6fszKK02 | KK:120-166,KK:171-175,KK:197-206,KK:215-401,KK:406-410,KK:412-423,KK:431-456 | DNA_pol_A_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 28 | KK | e6fszKK03 | KK:457-508 | HRDC | 102 → 102.1 → 102.1.1 |
| 29 | LL | e6fszLL1 | LL:5-117 | Sas10_Utp3 | 3911 → 3911.1 → 3911.1.1 |
| 30 | MM | e6fszMM1 | MM:609-674,MM:803-873 | 3324.1.1.2 | 3324 → 3324.1 → 3324.1.1 |
| 31 | MM | e6fszMM2 | MM:324-361,MM:392-577 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 32 | MM | e6fszMM3 | MM:4-17,MM:80-323 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 33 | MM | e6fszMM4 | MM:578-608,MM:874-910 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 34 | MM | e6fszMM5 | MM:675-802 | MTR4_beta-barrel | 4 → 4.1 → 4.1.1 |
| 35 | MM | e6fszMM6 | MM:911-1073 | DSHCT | 4156 → 4156.1 → 4156.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors