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PDB 6GYM

ELECTRON MICROSCOPY0 chains59 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (59)

#ChainDomain IDRangeFamilyClassification
10e6gym030:503-723Helicase_C_22004 → 2004.1 → 2004.1.1
23e6gym313:8-79zf-C3HC4_5376 → 376.1 → 376.1.1
33e6gym323:80-145MAT1386 → 386.1 → 386.1.1
44e6gym414:286-323375.1.1.0375 → 375.1 → 375.1.1
54e6gym424:22-285Tfb42006 → 2006.1 → 2006.1.6
65e6gym515:2-67Tfb54340 → 4340.1 → 4340.1.1
76e6gym616:308-374375.1.1.0375 → 375.1 → 375.1.1
86e6gym626:375-457C1_4376 → 376.1 → 376.1.2
96e6gym636:123-307Ssl12006 → 2006.1 → 2006.1.6
107e6gym717:546-722ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
117e6gym727:723-770ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
127e6gym737:363-545ResIII2004 → 2004.1 → 2004.1.1
13Ae6gymA1A:1142-1272RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
14Ae6gymA2A:1060-1112,A:1331-1452RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
15Ae6gymA3A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
16Ae6gymA4A:1113-1141,A:1273-1330RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
17Ae6gymA5A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
18Ae6gymA6A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
19Ae6gymA7A:3-3364246.1.1.04246 → 4246.1 → 4246.1.1
20Ae6gymA8A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
21Ae6gymA9A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
22Be6gymB1B:1098-1223RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
23Be6gymB2B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
24Be6gymB3B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
25Be6gymB4B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
26Be6gymB5B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
27Be6gymB6B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
28Be6gymB7B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
29Ce6gymC1C:4-41,C:173-265RNA_pol_L305 → 305.1 → 305.1.1
30Ce6gymC2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
31De6gymD1D:24-71,D:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
32Ee6gymE1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
33Ee6gymE2E:3-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
34Fe6gymF1F:72-154RNA_pol_Rpb6152 → 152.1 → 152.1.1
35Ge6gymG1G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
36Ge6gymG2G:69-171S12 → 2.1 → 2.1.1
37He6gymH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
38Ie6gymI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
39Ie6gymI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
40Je6gymJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
41Ke6gymK1K:1-112RNA_pol_L_2305 → 305.1 → 305.1.1
42Le6gymL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
43Me6gymM1M:233-326TFIIB101 → 101.1 → 101.1.10
44Me6gymM2M:67-218TFIIB101 → 101.1 → 101.1.10
45Me6gymM3M:16-68TF_Zn_Ribbon375 → 375.1 → 375.1.1
46Oe6gymO1O:61-156TBP331 → 331.1 → 331.1.1
47Oe6gymO2O:157-240TBP331 → 331.1 → 331.1.1
48Qe6gymQ1Q:21-35,Q:97-142,Q:327-415TFIIF_alpha59 → 59.1 → 59.1.1
49Re6gymR1R:291-351TFIIF_beta101 → 101.1 → 101.1.2
50Re6gymR2R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
51Ue6gymU1U:2-47TFIIA104 → 104.1 → 104.1.1
52Ue6gymU2U:241-286TFIIA74 → 74.1 → 74.1.1
53Ve6gymV1V:55-119TFIIA_gamma_C74 → 74.1 → 74.1.1
54Ve6gymV2V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
55We6gymW01W:1-102,W:173-271TFIIE_alpha101 → 101.1 → 101.1.2
56We6gymW02W:103-172TF_Zn_Ribbon375 → 375.1 → 375.1.1
57Xe6gymX1X:250-283TFA2_E-tether101 → 101.1 → 101.1.2
58Xe6gymX2X:189-249TFA2_Winged_2101 → 101.1 → 101.1.2
59Xe6gymX3X:123-188TFIIE_beta101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors