PDB 6J9E
ELECTRON MICROSCOPY0 chains26 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
10 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Fview chain
2 domainsChain Jview chain
1 domainAll Domains (26)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6j9eA1 | A:53-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e6j9eA2 | A:11-52,A:173-231 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e6j9eB1 | B:9-52,B:178-230 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e6j9eB2 | B:53-177 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e6j9eC1 | C:968-1010,C:1052-1085 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 6 | C | e6j9eC2 | C:157-230,C:349-479 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e6j9eC3 | C:1282-1382 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e6j9eC4 | C:241-255,C:277-294 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 9 | C | e6j9eC5 | C:741-819 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | C | e6j9eC6 | C:820-856,C:1104-1281 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 11 | C | e6j9eC7 | C:606-740 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 12 | C | e6j9eC8 | C:3-156,C:480-605 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | C | e6j9eC9 | C:857-967,C:1086-1103 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 14 | C | e6j9eC10 | C:231-240,C:295-348 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 15 | D | e6j9eD1 | D:897-933,D:1215-1371 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 16 | D | e6j9eD2 | D:499-639 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e6j9eD3 | D:946-1024 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 18 | D | e6j9eD4 | D:1-341 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 19 | D | e6j9eD5 | D:1139-1216 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 20 | D | e6j9eD6 | D:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 21 | D | e6j9eD7 | D:812-896 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 22 | D | e6j9eD8 | D:640-811 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 23 | E | e6j9eE1 | E:6-76 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 24 | F | e6j9eF1 | F:1-63,F:97-129 | NusA_N | 885 → 885.1 → 885.1.1 |
| 25 | F | e6j9eF2 | F:130-212 | S1 | 2 → 2.1 → 2.1.1 |
| 26 | J | e6j9eJ1 | J:2-67 | Xp10_P7 | 330 → 330.12 → 330.12.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors