PDB 6KDM
X-RAY DIFFRACTION2.32 Å0 chains14 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
3 domainsChain Dview chain
3 domainsAll Domains (14)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6kdmA1 | A:429-553 | RNase_H | 2484 → 2484.1 → 2484.1.1 |
| 2 | A | e6kdmA2 | A:243-316 | RVT_thumb | 4967 → 4967.1 → 4967.1.1 |
| 3 | A | e6kdmA3 | A:1-242 | RVT_1 | 304 → 304.48 → 304.48.1 |
| 4 | A | e6kdmA4 | A:317-428 | RVT_connect | 2484 → 2484.5 → 2484.5.1 |
| 5 | B | e6kdmB1 | B:5-242 | RVT_1 | 304 → 304.48 → 304.48.1 |
| 6 | B | e6kdmB2 | B:317-427 | RVT_connect | 2484 → 2484.5 → 2484.5.1 |
| 7 | B | e6kdmB3 | B:243-316 | RVT_thumb | 4967 → 4967.1 → 4967.1.1 |
| 8 | C | e6kdmC1 | C:243-316 | RVT_thumb | 4967 → 4967.1 → 4967.1.1 |
| 9 | C | e6kdmC2 | C:1-242 | RVT_1 | 304 → 304.48 → 304.48.1 |
| 10 | C | e6kdmC3 | C:429-553 | RNase_H | 2484 → 2484.1 → 2484.1.1 |
| 11 | C | e6kdmC4 | C:317-428 | RVT_connect | 2484 → 2484.5 → 2484.5.1 |
| 12 | D | e6kdmD1 | D:5-242 | RVT_1 | 304 → 304.48 → 304.48.1 |
| 13 | D | e6kdmD2 | D:317-427 | RVT_connect | 2484 → 2484.5 → 2484.5.1 |
| 14 | D | e6kdmD3 | D:243-316 | RVT_thumb | 4967 → 4967.1 → 4967.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors