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PDB 6KE6

ELECTRON MICROSCOPY0 chains93 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (93)

#ChainDomain IDRangeFamilyClassification
13Be6ke63B13B:82-326Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce6ke63C13C:86-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De6ke63D13D:288-329,3D:370-415Nop102 → 102.1 → 102.1.4
43De6ke63D23D:168-298Nop606 → 606.1 → 606.1.1
53De6ke63D33D:3-167NOP5NT3407 → 3407.1 → 3407.1.1
63Ee6ke63E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee6ke63E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee6ke63E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe6ke63F13F:129-570WD405 → 5.1 → 5.1.4
103Ge6ke63G13G:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He6ke63H13H:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
125Ce6ke65C15C:58-473WD40,BING4CT5 → 5.1 → 5.1.5
135Fe6ke65F15F:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
145Ge6ke65G15G:84-267Brix7502 → 7502.1 → 7502.1.1
155Ie6ke65I15I:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
165Ke6ke65K15K:57-182Fcf12006 → 2006.1 → 2006.1.4
17A4e6ke6A41A4:29-374WD405 → 5.1 → 5.1.4
18A4e6ke6A42A4:375-681,A4:731-7765.1.4.05 → 5.1 → 5.1.4
19A5e6ke6A51A5:434-557Utp12109 → 109.54 → 109.54.1
20A5e6ke6A52A5:3-3725.1.5.05 → 5.1 → 5.1.5
21A9e6ke6A91A9:389-516109.54.1.0109 → 109.54 → 109.54.1
22AEe6ke6AE1AE:2-432U3snoRNP10109 → 109.4 → 109.4.1
23AEe6ke6AE2AE:463-808109.4.1.0109 → 109.4 → 109.4.1
24AFe6ke6AF1AF:34-364WD405 → 5.1 → 5.1.5
25AFe6ke6AF2AF:2-33,AF:388-512UTP15_C109 → 109.54 → 109.54.1
26B1e6ke6B11B1:343-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
27B1e6ke6B12B1:2-223,B1:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
28B1e6ke6B13B1:735-856Utp12109 → 109.54 → 109.54.1
29B2e6ke6B21B2:745-921Utp12109 → 109.54 → 109.54.1
30B2e6ke6B22B2:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
31B2e6ke6B23B2:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
32B3e6ke6B31B3:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
33B3e6ke6B32B3:650-817Utp13109 → 109.54 → 109.54.1
34B3e6ke6B33B3:3-331WD405 → 5.1 → 5.1.4
35B6e6ke6B601B6:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
36B8e6ke6B81B8:235-591WD405 → 5.1 → 5.1.4
37BEe6ke6BE1BE:350-684WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
38BEe6ke6BE2BE:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
39RAe6ke6RA1RA:2-21,RA:41-360Beta-prop_NOL10_N5 → 5.1 → 5.1.5
40RCe6ke6RC1RC:120-212KRR1-like_KH2327 → 327.11 → 327.11.2
41RCe6ke6RC2RC:38-119KH_8327 → 327.11 → 327.11.2
42REe6ke6RE1RE:1092-1237Nrap_D6304 → 304.20 → 304.20.1
43REe6ke6RE2RE:515-698Nrap_D3304 → 304.20 → 304.20.1
44REe6ke6RE3RE:699-905Nrap_D4316 → 316.1 → 316.1.1
45REe6ke6RE4RE:100-356Nrap316 → 316.1 → 316.1.1
46REe6ke6RE5RE:357-514Nrap_D2102 → 102.1 → 102.1.3
47REe6ke6RE6RE:906-983,RE:1010-1091Nrap_D5102 → 102.1 → 102.1.3
48RFe6ke6RF1RF:3-272RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
49RGe6ke6RG1RG:29-251EMG12488 → 2488.1 → 2488.1.1
50RHe6ke6RH1RH:16-251EMG12488 → 2488.1 → 2488.1.1
51RIe6ke6RI1RI:64-178Ribosomal_L12007 → 2007.25 → 2007.25.1
52RIe6ke6RI2RI:6-63,RI:179-257Ribosomal_L1898 → 898.1 → 898.1.1
53RJe6ke6RJ1RJ:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
54RJe6ke6RJ2RJ:929-1016RIBIOP_C1 → 1.1 → 1.1.7
55RJe6ke6RJ3RJ:818-928RIBIOP_C1 → 1.1 → 1.1.8
56RJe6ke6RJ4RJ:236-305,RJ:614-636,RJ:787-817AARP2CN1 → 1.1 → 1.1.7
57RKe6ke6RK1RK:7-182,RK:287-366RTC328 → 328.6 → 328.6.1
58RKe6ke6RK2RK:183-287RTC_insert2485 → 2485.2 → 2485.2.1
59RLe6ke6RL1RL:498-661,RL:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
60RLe6ke6RL2RL:211-433,RL:464-497Helicase_RecD2004 → 2004.1 → 2004.1.1
61RLe6ke6RL3RL:3-210TmcA_N2004 → 2004.1 → 2004.1.1
62RLe6ke6RL4RL:835-932tRNA_bind_2101 → 101.1 → 101.1.1
63RMe6ke6RM1RM:498-661,RM:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
64RMe6ke6RM2RM:211-433,RM:467-497Helicase_RecD2004 → 2004.1 → 2004.1.1
65RMe6ke6RM3RM:3-66,RM:92-210TmcA_N2004 → 2004.1 → 2004.1.1
66RMe6ke6RM4RM:835-932tRNA_bind_2101 → 101.1 → 101.1.1
67RSe6ke6RS1RS:209-465Bystin109 → 109.4 → 109.4.1
68RTe6ke6RT1RT:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
69RTe6ke6RT2RT:95-177KH_8327 → 327.11 → 327.11.2
70Sce6ke6Sc1Sc:3-82Ribosomal_S27e375 → 375.1 → 375.1.1
71SCe6ke6SC1SC:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
72SCe6ke6SC2SC:15-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
73Sde6ke6Sd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
74SFe6ke6SF1SF:13-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
75SFe6ke6SF2SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
76SFe6ke6SF3SF:176-241KOW,40S_S4_C4 → 4.1 → 4.1.1
77SGe6ke6SG1SG:13-225Ribosomal_S7167 → 167.1 → 167.1.1
78SHe6ke6SH1SH:1-125Ribosomal_S6e239 → 239.1 → 239.1.1
79SIe6ke6SI1SI:6-96,SI:116-117Ribosomal_S7e327 → 327.18 → 327.18.1
80SIe6ke6SI2SI:118-189Ribosomal_S7e327 → 327.18 → 327.18.1
81SJe6ke6SJ1SJ:2-121,SJ:151-196Ribosomal_S8e3174 → 3174.1 → 3174.1.1
82SKe6ke6SK1SK:12-182Ribosomal_S4,S4221 → 221.1 → 221.1.2
83SMe6ke6SM1SM:8-143Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
84SNe6ke6SN1SN:25-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
85SOe6ke6SO1SO:9-82Ribosomal_S13_N101 → 101.40 → 101.40.1
86SOe6ke6SO2SO:83-142Ribosomal_S15616 → 616.1 → 616.1.1
87SPe6ke6SP1SP:11-128Ribosomal_S112484 → 2484.1 → 2484.1.1
88SRe6ke6SR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
89STe6ke6ST1ST:2-125Ribosomal_S13102 → 102.2 → 102.2.1
90SXe6ke6SX1SX:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
91SXe6ke6SX2SX:4-67Ribosomal_S8320 → 320.2 → 320.2.1
92SYe6ke6SY1SY:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
93SZe6ke6SZ1SZ:4-105Ribosomal_S24e304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors