PDB 6KF4
ELECTRON MICROSCOPY0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainsChain Cview chain
4 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Nview chain
1 domainChain Pview chain
1 domainAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6kf4A1 | A:667-904 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 2 | A | e6kf4A2 | A:500-666 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 3 | A | e6kf4A3 | A:313-499 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e6kf4A4 | A:4-312 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 5 | B | e6kf4B1 | B:574-713 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 6 | B | e6kf4B2 | B:9-174,B:347-484 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 7 | B | e6kf4B3 | B:714-751,B:877-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | B | e6kf4B4 | B:1000-1009,B:1032-1122 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 9 | B | e6kf4B5 | B:752-876 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | B | e6kf4B6 | B:485-574 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 11 | B | e6kf4B7 | B:173-346 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | C | e6kf4C1 | C:2-59 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 13 | C | e6kf4C2 | C:110-141,C:225-267 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 14 | C | e6kf4C3 | C:142-224 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 15 | C | e6kf4C4 | C:60-109,C:268-389 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 16 | D | e6kf4D1 | D:38-148 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 17 | D | e6kf4D2 | D:2-37,D:149-188,D:208-258 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | E | e6kf4E1 | E:79-181 | S1 | 2 → 2.1 → 2.1.1 |
| 19 | E | e6kf4E2 | E:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 20 | F | e6kf4F1 | F:1-122 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 21 | G | e6kf4G1 | G:4-86 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 22 | G | e6kf4G2 | G:87-169 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 23 | H | e6kf4H1 | H:6-81 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 24 | K | e6kf4K1 | K:2-57 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 25 | L | e6kf4L1 | L:1-94 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 26 | N | e6kf4N1 | N:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 27 | P | e6kf4P1 | P:8-49 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors