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PDB 6LQS

ELECTRON MICROSCOPY0 chains111 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (111)

#ChainDomain IDRangeFamilyClassification
13Be6lqs3B13B:82-326Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce6lqs3C13C:86-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De6lqs3D13D:288-329,3D:370-415Nop102 → 102.1 → 102.1.4
43De6lqs3D23D:3-167NOP5NT3407 → 3407.1 → 3407.1.1
53De6lqs3D33D:168-298Nop606 → 606.1 → 606.1.1
63Ee6lqs3E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee6lqs3E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee6lqs3E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe6lqs3F13F:113-570WD405 → 5.1 → 5.1.4
103Ge6lqs3G13G:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He6lqs3H13H:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
125Ce6lqs5C15C:36-466,5C:544-553WD40,BING4CT5 → 5.1 → 5.1.5
135Fe6lqs5F15F:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
145Ge6lqs5G15G:75-267Brix7502 → 7502.1 → 7502.1.1
155Ie6lqs5I15I:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
165Ke6lqs5K15K:57-182Fcf12006 → 2006.1 → 2006.1.4
17A4e6lqsA41A4:375-681,A4:731-7765.1.4.05 → 5.1 → 5.1.4
18A4e6lqsA42A4:29-374WD405 → 5.1 → 5.1.4
19A5e6lqsA51A5:434-557Utp12109 → 109.54 → 109.54.1
20A5e6lqsA52A5:3-3725.1.5.05 → 5.1 → 5.1.5
21A9e6lqsA91A9:389-516109.54.1.0109 → 109.54 → 109.54.1
22AEe6lqsAE1AE:3-421U3snoRNP10109 → 109.4 → 109.4.1
23AFe6lqsAF1AF:2-364WD405 → 5.1 → 5.1.5
24AFe6lqsAF2AF:388-512UTP15_C109 → 109.54 → 109.54.1
25B1e6lqsB11B1:343-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
26B1e6lqsB12B1:735-856Utp12109 → 109.54 → 109.54.1
27B1e6lqsB13B1:2-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
28B2e6lqsB21B2:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
29B2e6lqsB22B2:745-917Utp12109 → 109.54 → 109.54.1
30B2e6lqsB23B2:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
31B3e6lqsB31B3:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
32B3e6lqsB32B3:3-331WD405 → 5.1 → 5.1.4
33B3e6lqsB33B3:650-817Utp13109 → 109.54 → 109.54.1
34B6e6lqsB61B6:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
35B8e6lqsB81B8:235-591WD405 → 5.1 → 5.1.4
36BEe6lqsBE1BE:19-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
37BEe6lqsBE2BE:350-670,BE:702-719WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
38BEe6lqsBE3BE:705-736,BE:815-939Utp21109 → 109.54 → 109.54.1
39C4e6lqsC41C4:8-68,C4:106-114CSL4_N325 → 325.1 → 325.1.8
40C4e6lqsC42C4:126-291EXOSC12 → 2.1 → 2.1.1
41M3e6lqsM31M3:4-185RNase_PH212 → 212.1 → 212.1.1
42M3e6lqsM32M3:183-248245.1.1.0245 → 245.1 → 245.1.1
43M4e6lqsM41M4:911-1071DSHCT4156 → 4156.1 → 4156.1.1
44M4e6lqsM42M4:80-323DEAD2004 → 2004.1 → 2004.1.1
45M4e6lqsM43M4:324-361,M4:392-577Helicase_C2004 → 2004.1 → 2004.1.1
46M4e6lqsM44M4:666-816MTR4_beta-barrel4 → 4.1 → 4.1.1
47M4e6lqsM45M4:578-608,M4:874-910101.1.2.0101 → 101.1 → 101.1.2
48R0e6lqsR01R0:62-151RRP40_S12 → 2.1 → 2.1.1
49R0e6lqsR02R0:1-63Rrp40_N325 → 325.1 → 325.1.8
50R0e6lqsR03R0:152-237KH_6327 → 327.11 → 327.11.2
51R1e6lqsR11R1:1-152RNase_PH212 → 212.1 → 212.1.1
52R1e6lqsR12R1:153-244RNase_PH_C245 → 245.1 → 245.1.1
53R2e6lqsR21R2:181-265245.1.1.0245 → 245.1 → 245.1.1
54R2e6lqsR22R2:1-180212.1.1.0212 → 212.1 → 212.1.1
55R3e6lqsR31R3:287-394245.1.1.0245 → 245.1 → 245.1.1
56R3e6lqsR32R3:8-286RNase_PH212 → 212.1 → 212.1.1
57r4e6lqsr41r4:102-196RRP4_S12 → 2.1 → 2.1.1
58r4e6lqsr42r4:196-245,r4:276-356KH_6327 → 327.11 → 327.11.2
59r4e6lqsr43r4:2-17,r4:50-101ECR1_N325 → 325.1 → 325.1.8
60R4e6lqsR41R4:9-236PIN_42006 → 2006.1 → 2006.1.4
61R4e6lqsR42R4:495-910RNB2 → 2.9 → 2.9.1
62R4e6lqsR43R4:400-494OB_Dis32 → 2.1 → 2.1.1
63R4e6lqsR44R4:237-329,R4:364-399Rrp44_CSD12 → 2.1 → 2.1.1
64R4e6lqsR45R4:911-1001Rrp44_S12 → 2.1 → 2.1.1
65R5e6lqsR51R5:3-186RNase_PH212 → 212.1 → 212.1.1
66R5e6lqsR52R5:187-301RNase_PH_C245 → 245.1 → 245.1.1
67r6e6lqsr61r6:5-106PMC2NT3910 → 3910.1 → 3910.1.1
68R6e6lqsR61R6:126-223RNase_PH_C245 → 245.1 → 245.1.1
69R6e6lqsR62R6:1-125RNase_PH212 → 212.1 → 212.1.1
70R7e6lqsR71R7:33-1173911.1.1.03911 → 3911.1 → 3911.1.1
71RDe6lqsRD1RD:1192-1224,RD:1457-1721HAT_PRP39_N109 → 109.4 → 109.4.1
72REe6lqsRE1RE:906-1091Nrap_D5102 → 102.1 → 102.1.3
73REe6lqsRE2RE:699-905Nrap_D4316 → 316.1 → 316.1.1
74REe6lqsRE3RE:1092-1237Nrap_D6304 → 304.20 → 304.20.1
75REe6lqsRE4RE:357-514Nrap_D2102 → 102.1 → 102.1.3
76REe6lqsRE5RE:100-356Nrap316 → 316.1 → 316.1.1
77REe6lqsRE6RE:515-698Nrap_D3304 → 304.20 → 304.20.1
78RFe6lqsRF1RF:3-272RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
79RGe6lqsRG1RG:29-251EMG12488 → 2488.1 → 2488.1.1
80RHe6lqsRH1RH:16-251EMG12488 → 2488.1 → 2488.1.1
81RJe6lqsRJ1RJ:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
82RJe6lqsRJ2RJ:929-1016RIBIOP_C1 → 1.1 → 1.1.7
83RJe6lqsRJ3RJ:818-928RIBIOP_C1 → 1.1 → 1.1.8
84RJe6lqsRJ4RJ:236-305,RJ:614-636,RJ:787-817AARP2CN1 → 1.1 → 1.1.7
85RKe6lqsRK1RK:7-182,RK:287-366RTC328 → 328.6 → 328.6.1
86RKe6lqsRK2RK:183-287RTC_insert2485 → 2485.2 → 2485.2.1
87RSe6lqsRS1RS:209-465Bystin109 → 109.4 → 109.4.1
88RTe6lqsRT1RT:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
89RTe6lqsRT2RT:95-177KH_8327 → 327.11 → 327.11.2
90Sce6lqsSc1Sc:3-82Ribosomal_S27e375 → 375.1 → 375.1.1
91SCe6lqsSC1SC:114-244Ribosomal_S3Ae230 → 230.6 → 230.6.1
92SCe6lqsSC2SC:13-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
93Sde6lqsSd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
94SFe6lqsSF1SF:9-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
95SFe6lqsSF2SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
96SFe6lqsSF3SF:176-258KOW,40S_S4_C4 → 4.1 → 4.1.1
97SGe6lqsSG1SG:13-225Ribosomal_S7167 → 167.1 → 167.1.1
98SHe6lqsSH1SH:1-62,SH:100-219Ribosomal_S6e239 → 239.1 → 239.1.1
99SIe6lqsSI1SI:6-96Ribosomal_S7e327 → 327.18 → 327.18.1
100SIe6lqsSI2SI:117-189Ribosomal_S7e327 → 327.18 → 327.18.1
101SJe6lqsSJ1SJ:30-121,SJ:153-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
102SKe6lqsSK1SK:12-182Ribosomal_S4,S4221 → 221.1 → 221.1.2
103SMe6lqsSM1SM:6-142Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
104SOe6lqsSO1SO:83-142Ribosomal_S15616 → 616.1 → 616.1.1
105SOe6lqsSO2SO:9-82Ribosomal_S13_N101 → 101.40 → 101.40.1
106SPe6lqsSP1SP:11-128Ribosomal_S112484 → 2484.1 → 2484.1.1
107SRe6lqsSR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
108SXe6lqsSX1SX:4-67Ribosomal_S8320 → 320.2 → 320.2.1
109SXe6lqsSX2SX:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
110SYe6lqsSY1SY:39-144Ribosom_S12_S232 → 2.1 → 2.1.1
111SZe6lqsSZ1SZ:4-126Ribosomal_S24e304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors