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PDB 6LQT

ELECTRON MICROSCOPY0 chains76 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (76)

#ChainDomain IDRangeFamilyClassification
13Be6lqt3B13B:82-326Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce6lqt3C13C:86-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De6lqt3D13D:288-329,3D:370-415Nop102 → 102.1 → 102.1.4
43De6lqt3D23D:3-167NOP5NT3407 → 3407.1 → 3407.1.1
53De6lqt3D33D:168-298Nop606 → 606.1 → 606.1.1
63Ee6lqt3E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee6lqt3E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee6lqt3E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe6lqt3F13F:113-570WD405 → 5.1 → 5.1.4
103Ge6lqt3G13G:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He6lqt3H13H:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
125Ce6lqt5C15C:36-466,5C:544-553WD40,BING4CT5 → 5.1 → 5.1.5
135Fe6lqt5F15F:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
145Ge6lqt5G15G:75-267Brix7502 → 7502.1 → 7502.1.1
155Ie6lqt5I15I:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
165Ke6lqt5K15K:57-182Fcf12006 → 2006.1 → 2006.1.4
17A4e6lqtA41A4:29-374WD405 → 5.1 → 5.1.4
18A4e6lqtA42A4:375-681,A4:731-7765.1.4.05 → 5.1 → 5.1.4
19A5e6lqtA51A5:2-3685.1.5.05 → 5.1 → 5.1.5
20A9e6lqtA91A9:389-516109.54.1.0109 → 109.54 → 109.54.1
21AEe6lqtAE1AE:2-432U3snoRNP10109 → 109.4 → 109.4.1
22AFe6lqtAF1AF:2-364WD405 → 5.1 → 5.1.5
23AFe6lqtAF2AF:388-512UTP15_C109 → 109.54 → 109.54.1
24B1e6lqtB11B1:343-646,B1:675-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
25B1e6lqtB12B1:2-223,B1:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
26B1e6lqtB13B1:735-856Utp12109 → 109.54 → 109.54.1
27B2e6lqtB21B2:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
28B2e6lqtB22B2:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
29B2e6lqtB23B2:745-917Utp12109 → 109.54 → 109.54.1
30B3e6lqtB31B3:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
31B3e6lqtB32B3:3-331WD405 → 5.1 → 5.1.4
32B3e6lqtB33B3:650-817Utp13109 → 109.54 → 109.54.1
33B6e6lqtB61B6:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
34B8e6lqtB81B8:235-591WD405 → 5.1 → 5.1.4
35BEe6lqtBE1BE:19-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
36BEe6lqtBE2BE:705-736,BE:815-939Utp21109 → 109.54 → 109.54.1
37BEe6lqtBE3BE:350-670,BE:702-719WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
38RDe6lqtRD1RD:1192-1224,RD:1457-1721HAT_PRP39_N109 → 109.4 → 109.4.1
39REe6lqtRE1RE:515-698Nrap_D3304 → 304.20 → 304.20.1
40REe6lqtRE2RE:906-983,RE:1010-1091Nrap_D5102 → 102.1 → 102.1.3
41REe6lqtRE3RE:1092-1237Nrap_D6304 → 304.20 → 304.20.1
42REe6lqtRE4RE:357-514Nrap_D2102 → 102.1 → 102.1.3
43REe6lqtRE5RE:699-905Nrap_D4316 → 316.1 → 316.1.1
44REe6lqtRE6RE:100-356Nrap316 → 316.1 → 316.1.1
45RFe6lqtRF1RF:3-272RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
46RHe6lqtRH1RH:27-251EMG12488 → 2488.1 → 2488.1.1
47RJe6lqtRJ1RJ:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
48RJe6lqtRJ2RJ:929-1016RIBIOP_C1 → 1.1 → 1.1.7
49RJe6lqtRJ3RJ:818-928RIBIOP_C1 → 1.1 → 1.1.8
50RJe6lqtRJ4RJ:236-305,RJ:614-636,RJ:787-817AARP2CN1 → 1.1 → 1.1.7
51RKe6lqtRK1RK:183-287RTC_insert2485 → 2485.2 → 2485.2.1
52RKe6lqtRK2RK:7-182,RK:287-366RTC328 → 328.6 → 328.6.1
53RTe6lqtRT1RT:95-177KH_8327 → 327.11 → 327.11.2
54RTe6lqtRT2RT:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
55Sce6lqtSc1Sc:3-82Ribosomal_S27e375 → 375.1 → 375.1.1
56SCe6lqtSC1SC:114-244Ribosomal_S3Ae230 → 230.6 → 230.6.1
57SCe6lqtSC2SC:13-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
58Sde6lqtSd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
59SFe6lqtSF1SF:176-258KOW,40S_S4_C4 → 4.1 → 4.1.1
60SFe6lqtSF2SF:9-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
61SFe6lqtSF3SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
62SGe6lqtSG1SG:13-225Ribosomal_S7167 → 167.1 → 167.1.1
63SHe6lqtSH1SH:1-62,SH:100-219Ribosomal_S6e239 → 239.1 → 239.1.1
64SIe6lqtSI1SI:117-189Ribosomal_S7e327 → 327.18 → 327.18.1
65SIe6lqtSI2SI:6-96Ribosomal_S7e327 → 327.18 → 327.18.1
66SJe6lqtSJ1SJ:30-121,SJ:153-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
67SKe6lqtSK1SK:12-182Ribosomal_S4,S4221 → 221.1 → 221.1.2
68SMe6lqtSM1SM:6-142Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
69SOe6lqtSO1SO:9-82Ribosomal_S13_N101 → 101.40 → 101.40.1
70SOe6lqtSO2SO:83-142Ribosomal_S15616 → 616.1 → 616.1.1
71SPe6lqtSP1SP:11-128Ribosomal_S112484 → 2484.1 → 2484.1.1
72SRe6lqtSR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
73SXe6lqtSX1SX:4-67Ribosomal_S8320 → 320.2 → 320.2.1
74SXe6lqtSX2SX:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
75SYe6lqtSY1SY:39-144Ribosom_S12_S232 → 2.1 → 2.1.1
76SZe6lqtSZ1SZ:4-126Ribosomal_S24e304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors