Home/PDB

PDB 6LQV

ELECTRON MICROSCOPY0 chains68 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (68)

#ChainDomain IDRangeFamilyClassification
13Be6lqv3B13B:82-326Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce6lqv3C13C:86-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De6lqv3D13D:3-167NOP5NT3407 → 3407.1 → 3407.1.1
43De6lqv3D23D:168-298Nop606 → 606.1 → 606.1.1
53De6lqv3D33D:288-329,3D:370-415Nop102 → 102.1 → 102.1.4
63Ee6lqv3E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee6lqv3E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee6lqv3E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe6lqv3F13F:58-77,3F:129-570WD405 → 5.1 → 5.1.4
103Ge6lqv3G13G:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He6lqv3H13H:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
125Ce6lqv5C15C:58-466WD40,BING4CT5 → 5.1 → 5.1.5
135Fe6lqv5F15F:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
145Ge6lqv5G15G:72-267Brix7502 → 7502.1 → 7502.1.1
155Ie6lqv5I15I:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
165Ke6lqv5K15K:57-182Fcf12006 → 2006.1 → 2006.1.4
17A4e6lqvA41A4:375-681,A4:731-7765.1.4.05 → 5.1 → 5.1.4
18A4e6lqvA42A4:29-374WD405 → 5.1 → 5.1.4
19A5e6lqvA51A5:434-557Utp12109 → 109.54 → 109.54.1
20A5e6lqvA52A5:3-3725.1.5.05 → 5.1 → 5.1.5
21A9e6lqvA91A9:389-516109.54.1.0109 → 109.54 → 109.54.1
22AEe6lqvAE1AE:3-421U3snoRNP10109 → 109.4 → 109.4.1
23AFe6lqvAF1AF:34-364WD405 → 5.1 → 5.1.5
24AFe6lqvAF2AF:2-33,AF:388-512UTP15_C109 → 109.54 → 109.54.1
25B1e6lqvB11B1:735-856Utp12109 → 109.54 → 109.54.1
26B1e6lqvB12B1:2-223,B1:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
27B1e6lqvB13B1:343-633,B1:675-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
28B2e6lqvB21B2:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
29B2e6lqvB22B2:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
30B2e6lqvB23B2:745-917Utp12109 → 109.54 → 109.54.1
31B3e6lqvB31B3:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
32B3e6lqvB32B3:3-331WD405 → 5.1 → 5.1.4
33B3e6lqvB33B3:650-817Utp13109 → 109.54 → 109.54.1
34B6e6lqvB61B6:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
35B8e6lqvB81B8:235-591WD405 → 5.1 → 5.1.4
36BEe6lqvBE1BE:19-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
37BEe6lqvBE2BE:350-670,BE:702-719WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
38BEe6lqvBE3BE:705-736,BE:815-939Utp21109 → 109.54 → 109.54.1
39RAe6lqvRA1RA:2-21,RA:41-360Beta-prop_NOL10_N5 → 5.1 → 5.1.5
40RGe6lqvRG1RG:29-251EMG12488 → 2488.1 → 2488.1.1
41RHe6lqvRH1RH:16-251EMG12488 → 2488.1 → 2488.1.1
42RJe6lqvRJ1RJ:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
43RJe6lqvRJ2RJ:929-1016RIBIOP_C1 → 1.1 → 1.1.7
44RJe6lqvRJ3RJ:818-928RIBIOP_C1 → 1.1 → 1.1.8
45RJe6lqvRJ4RJ:236-305,RJ:614-636,RJ:787-817AARP2CN1 → 1.1 → 1.1.7
46RKe6lqvRK1RK:7-182,RK:287-366RTC328 → 328.6 → 328.6.1
47RKe6lqvRK2RK:183-287RTC_insert2485 → 2485.2 → 2485.2.1
48RLe6lqvRL1RL:498-661,RL:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
49RLe6lqvRL2RL:211-433,RL:464-497Helicase_RecD2004 → 2004.1 → 2004.1.1
50RLe6lqvRL3RL:3-210TmcA_N2004 → 2004.1 → 2004.1.1
51RLe6lqvRL4RL:835-932tRNA_bind_2101 → 101.1 → 101.1.1
52RMe6lqvRM1RM:498-661,RM:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
53RMe6lqvRM2RM:211-433,RM:467-497Helicase_RecD2004 → 2004.1 → 2004.1.1
54RMe6lqvRM3RM:3-66,RM:92-210TmcA_N2004 → 2004.1 → 2004.1.1
55RMe6lqvRM4RM:835-932tRNA_bind_2101 → 101.1 → 101.1.1
56RSe6lqvRS1RS:209-465Bystin109 → 109.4 → 109.4.1
57Sde6lqvSd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
58SFe6lqvSF1SF:13-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
59SFe6lqvSF2SF:176-241KOW,40S_S4_C4 → 4.1 → 4.1.1
60SFe6lqvSF3SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
61SGe6lqvSG1SG:13-225Ribosomal_S7167 → 167.1 → 167.1.1
62SHe6lqvSH1SH:1-143,SH:183-219Ribosomal_S6e239 → 239.1 → 239.1.1
63SJe6lqvSJ1SJ:2-121,SJ:151-196Ribosomal_S8e3174 → 3174.1 → 3174.1.1
64SKe6lqvSK1SK:12-182Ribosomal_S4,S4221 → 221.1 → 221.1.2
65SMe6lqvSM1SM:8-143Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
66SRe6lqvSR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
67SYe6lqvSY1SY:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
68SZe6lqvSZ1SZ:4-105Ribosomal_S24e304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors