PDB 6MTD
ELECTRON MICROSCOPY0 chains100 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (100)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e6mtda1 | a:2-148 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 2 | A | e6mtdA1 | A:97-249 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 3 | A | e6mtdA2 | A:2-96 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 4 | aa | e6mtdaa1 | aa:2-102 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 5 | AA | e6mtdAA1 | AA:2-218 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 6 | b | e6mtdb1 | b:2-117 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 7 | B | e6mtdB1 | B:2-395 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 8 | bb | e6mtdbb1 | bb:2-84 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 9 | BB | e6mtdBB1 | BB:114-233 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 10 | BB | e6mtdBB2 | BB:21-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 11 | c | e6mtdc1 | c:10-107 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 12 | C | e6mtdC1 | C:2-273 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 13 | C | e6mtdC2 | C:274-363 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 14 | cc | e6mtdcc1 | cc:7-68 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 15 | CC | e6mtdCC1 | CC:58-134 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 16 | CC | e6mtdCC2 | CC:202-278 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 17 | CC | e6mtdCC3 | CC:135-201 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 18 | d | e6mtdd1 | d:18-124 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 19 | D | e6mtdD1 | D:3-295 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 20 | dd | e6mtddd1 | dd:2-56 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 21 | DD | e6mtdDD1 | DD:1-99 | KH_2 | 327 → 327.11 → 327.11.1 |
| 22 | DD | e6mtdDD2 | DD:92-228 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 23 | e | e6mtde1 | e:2-129 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 24 | E | e6mtdE1 | E:41-291 | Ribosomal_L6e,Ribosomal_L6e_N | 4 → 4.1 → 4.1.1 |
| 25 | ee | e6mtdee1 | ee:78-132 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 26 | EE | e6mtdEE1 | EE:2-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 27 | EE | e6mtdEE2 | EE:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 28 | EE | e6mtdEE3 | EE:176-263 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 29 | f | e6mtdf1 | f:2-110 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 30 | F | e6mtdF1 | F:23-247 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 31 | ff | e6mtdff1 | ff:83-150 | Ribosomal_S27 | 375 → 375.1 → 375.1.1 |
| 32 | FF | e6mtdFF1 | FF:14-204 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 33 | g | e6mtdg1 | g:2-115 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 34 | G | e6mtdG1 | G:80-319 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 35 | gg | e6mtdgg1 | gg:2-314 | WD40 | 5 → 5.1 → 5.1.4 |
| 36 | GG | e6mtdGG1 | GG:1-237 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 37 | h | e6mtdh1 | h:2-123 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 38 | H | e6mtdH1 | H:88-190 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 39 | H | e6mtdH2 | H:1-87 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 40 | HH | e6mtdHH1 | HH:6-107 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 41 | HH | e6mtdHH2 | HH:108-194 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 42 | i | e6mtdi1 | i:2-103 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 43 | I | e6mtdI1 | I:2-214 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 44 | II | e6mtdII1 | II:2-207 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 45 | j | e6mtdj1 | j:2-87 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 46 | J | e6mtdJ1 | J:8-177 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 47 | JJ | e6mtdJJ1 | JJ:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 48 | k | e6mtdk1 | k:2-70 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 49 | KK | e6mtdKK1 | KK:1-96 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 50 | l | e6mtdl1 | l:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 51 | L | e6mtdL1 | L:2-211 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 52 | LL | e6mtdLL1 | LL:3-153 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 53 | m | e6mtdm1 | m:51-102 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
| 54 | M | e6mtdM1 | M:2-139 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 55 | MM | e6mtdMM1 | MM:14-130 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 56 | n | e6mtdn1 | n:1-25 | Ribosomal_L41 | 6069 → 6069.1 → 6069.1.1 |
| 57 | N | e6mtdN1 | N:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 58 | NN | e6mtdNN1 | NN:83-150 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 59 | NN | e6mtdNN2 | NN:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 60 | o | e6mtdo1 | o:2-104 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 61 | O | e6mtdO1 | O:5-203 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 62 | OO | e6mtdOO1 | OO:16-151 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 63 | p | e6mtdp1 | p:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 64 | P | e6mtdP1 | P:2-154 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 65 | PP | e6mtdPP1 | PP:12-131 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 66 | Q | e6mtdQ1 | Q:2-188 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 67 | e6mtdQQ1 | QQ:5-146 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 | |
| 68 | r | e6mtdr1 | r:2-125 | Ribosomal_L28e | 3209 → 3209.1 → 3209.1.1 |
| 69 | R | e6mtdR1 | R:57-181 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 70 | R | e6mtdR2 | R:2-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 71 | RR | e6mtdRR1 | RR:2-133 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 72 | s | e6mtds1 | s:5-109,s:183-200 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 73 | s | e6mtds2 | s:110-182 | RL10P_insert | 3310 → 3310.1 → 3310.1.1 |
| 74 | S | e6mtdS1 | S:73-176 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 75 | S | e6mtdS2 | S:1-72 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 76 | SS | e6mtdSS1 | SS:2-145 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 77 | t | e6mtdt1 | t:74-161 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 78 | t | e6mtdt2 | t:9-73 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 79 | T | e6mtdT1 | T:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 80 | TT | e6mtdTT1 | TT:3-143 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 81 | u | e6mtdu1 | u:58-153 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 82 | u | e6mtdu2 | u:5-57,u:154-210 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 83 | U | e6mtdU1 | U:17-115 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 84 | UU | e6mtdUU1 | UU:18-117 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 85 | v | e6mtdv1 | v:577-741 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 86 | v | e6mtdv2 | v:2-359 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 87 | v | e6mtdv3 | v:498-576 | EFG_III | 304 → 304.24 → 304.24.1 |
| 88 | v | e6mtdv4 | v:742-858 | EFG_C | 304 → 304.24 → 304.24.1 |
| 89 | v | e6mtdv5 | v:360-497 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 90 | V | e6mtdV1 | V:10-140 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 91 | VV | e6mtdVV1 | VV:1-83 | Ribosomal_S21e | 3167 → 3167.1 → 3167.1.1 |
| 92 | W | e6mtdW1 | W:1-121 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 93 | WW | e6mtdWW1 | WW:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 94 | WW | e6mtdWW2 | WW:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 95 | X | e6mtdX1 | X:39-156 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 96 | XX | e6mtdXX1 | XX:2-142 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 97 | Y | e6mtdY1 | Y:1-134 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 98 | YY | e6mtdYY1 | YY:4-127 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 99 | Z | e6mtdZ1 | Z:2-136 | KOW,Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
| 100 | ZZ | e6mtdZZ1 | ZZ:41-115 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors