PDB 6ND4
ELECTRON MICROSCOPY0 chains31 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain cview chain
1 domainChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain Jview chain
2 domainsChain Kview chain
1 domainChain lview chain
1 domainChain Lview chain
2 domainsChain Mview chain
1 domainChain Nview chain
2 domainsChain Pview chain
1 domainChain Qview chain
3 domainsChain Sview chain
1 domainChain Uview chain
1 domainChain Wview chain
1 domainChain Zview chain
1 domainAll Domains (31)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e6nd4a1 | a:288-329,a:370-415 | Nop | 102 → 102.1 → 102.1.4 |
| 2 | a | e6nd4a2 | a:3-167 | NOP5NT | 3407 → 3407.1 → 3407.1.1 |
| 3 | a | e6nd4a3 | a:168-298 | Nop | 606 → 606.1 → 606.1.1 |
| 4 | c | e6nd4c1 | c:115-326 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 5 | d | e6nd4d1 | d:85-324 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 6 | e | e6nd4e1 | e:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 7 | f | e6nd4f1 | f:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 8 | g | e6nd4g1 | g:129-361,g:398-570 | WD40 | 5 → 5.1 → 5.1.4 |
| 9 | J | e6nd4J1 | J:34-364 | WD40 | 5 → 5.1 → 5.1.5 |
| 10 | J | e6nd4J2 | J:2-33,J:388-512 | UTP15_C | 109 → 109.54 → 109.54.1 |
| 11 | K | e6nd4K01 | K:428-528 | 109.54.1.0 | 109 → 109.54 → 109.54.1 |
| 12 | l | e6nd4l1 | l:57-182 | Fcf1 | 2006 → 2006.1 → 2006.1.4 |
| 13 | L | e6nd4L1 | L:3-372 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 14 | L | e6nd4L2 | L:436-557 | Utp12 | 109 → 109.54 → 109.54.1 |
| 15 | M | e6nd4M1 | M:2-432 | U3snoRNP10 | 109 → 109.4 → 109.4.1 |
| 16 | N | e6nd4N1 | N:29-374 | WD40 | 5 → 5.1 → 5.1.4 |
| 17 | N | e6nd4N2 | N:375-776 | 5.1.4.0 | 5 → 5.1 → 5.1.4 |
| 18 | O | e6nd4O1 | O:343-734 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 19 | O | e6nd4O2 | O:735-856 | Utp12 | 109 → 109.54 → 109.54.1 |
| 20 | O | e6nd4O3 | O:2-223,O:245-343 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 21 | P | e6nd4P01 | P:1-196 | U3_assoc_6, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 22 | Q | e6nd4Q1 | Q:386-711 | WD40, Beta-prop_WDR3_2nd | 5 → 5.1 → 5.1.4 |
| 23 | Q | e6nd4Q2 | Q:5-385 | WD40, Beta-prop_WDR3_1st | 5 → 5.1 → 5.1.4 |
| 24 | Q | e6nd4Q3 | Q:712-921 | Utp12 | 109 → 109.54 → 109.54.1 |
| 25 | S | e6nd4S1 | S:235-591 | WD40 | 5 → 5.1 → 5.1.4 |
| 26 | T | e6nd4T1 | T:350-672,T:708-719 | WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd | 5 → 5.1 → 5.1.4 |
| 27 | T | e6nd4T2 | T:705-736,T:815-939 | Utp21 | 109 → 109.54 → 109.54.1 |
| 28 | T | e6nd4T3 | T:19-349 | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | 5 → 5.1 → 5.1.4 |
| 29 | U | e6nd4U1 | U:65-379 | WD40, Beta-prop_NUP159_NUP214 | 5 → 5.1 → 5.1.4 |
| 30 | W | e6nd4W1 | W:64-448 | WD40,BING4CT | 5 → 5.1 → 5.1.5 |
| 31 | Z | e6nd4Z1 | Z:2-183 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors