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PDB 6ND5

X-RAY DIFFRACTION2.60 Å0 chains110 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (110)

#ChainDomain IDRangeFamilyClassification
110e6nd510110:2-84325.1.8.0325 → 325.1 → 325.1.8
211e6nd511111:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
312e6nd512112:1-70Ribosomal_L29192 → 192.4 → 192.4.1
413e6nd513113:2-60Ribosomal_L30887 → 887.1 → 887.1.1
514e6nd514114:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
615e6nd515115:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
716e6nd516116:2-54Ribosomal_L33375 → 375.1 → 375.1.1
817e6nd517117:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
918e6nd518118:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
1019e6nd519119:1-37Ribosomal_L36919 → 919.1 → 919.1.1
111be6nd51b11b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
121ce6nd51c11c:2-106KH_2327 → 327.11 → 327.11.1
131ce6nd51c21c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
141de6nd51d11d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
151De6nd51D11D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
161De6nd51D21D:2-126Ribosomal_L22 → 2.1 → 2.1.1
171ee6nd51e11e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
181ee6nd51e21e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
191Ee6nd51E11E:1-204Ribosomal_L31 → 1.1 → 1.1.7
201fe6nd51f11f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
211Fe6nd51F11F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
221ge6nd51g11g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
231Ge6nd51G11G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
241he6nd51h11h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
251he6nd51h21h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
261He6nd51H11H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
271He6nd51H21H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
281ie6nd51i11i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
291Ie6nd51I11I:56-146Ribosomal_L9_C523 → 523.1 → 523.1.1
301Ie6nd51I21I:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
311je6nd51j11j:4-100Ribosomal_S10304 → 304.44 → 304.44.1
321ke6nd51k11k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
331le6nd51l11l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
341me6nd51m11m:2-124Ribosomal_S13102 → 102.2 → 102.2.1
351ne6nd51n11n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
361Ne6nd51N11N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
371oe6nd51o11o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
381Oe6nd51O11O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
391pe6nd51p11p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
401Pe6nd51P11P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
411qe6nd51q11q:2-100Ribosomal_S172 → 2.1 → 2.1.1
421Qe6nd51Q11Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
431re6nd51r11r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
441Re6nd51R11R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
451se6nd51s11s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
461Se6nd51S11S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
471te6nd51t11t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
481Te6nd51T11T:1-131Ribosomal_L194 → 4.1 → 4.1.1
491Ue6nd51U11U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
501Ve6nd51V11V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
511We6nd51W11W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
521Xe6nd51X11X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
531Ye6nd51Y11Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
541Ze6nd51Z11Z:93-171Ribosomal_TL5_C240 → 240.1 → 240.1.1
551Ze6nd51Z21Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
5620e6nd520120:2-84325.1.8.0325 → 325.1 → 325.1.8
5721e6nd521121:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
5822e6nd522122:1-70Ribosomal_L29192 → 192.4 → 192.4.1
5923e6nd523123:2-60Ribosomal_L30887 → 887.1 → 887.1.1
6024e6nd524124:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
6125e6nd525125:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
6226e6nd526126:2-54Ribosomal_L33375 → 375.1 → 375.1.1
6327e6nd527127:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
6428e6nd528128:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
6529e6nd529129:1-37Ribosomal_L36919 → 919.1 → 919.1.1
662be6nd52b12b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
672ce6nd52c12c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
682ce6nd52c22c:2-106KH_2327 → 327.11 → 327.11.1
692de6nd52d12d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
702De6nd52D12D:2-126Ribosomal_L22 → 2.1 → 2.1.1
712De6nd52D22D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
722ee6nd52e12e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
732ee6nd52e22e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
742Ee6nd52E12E:1-204Ribosomal_L31 → 1.1 → 1.1.7
752fe6nd52f12f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
762Fe6nd52F12F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
772ge6nd52g12g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
782Ge6nd52G12G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
792he6nd52h12h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
802he6nd52h22h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
812He6nd52H12H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
822He6nd52H22H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
832ie6nd52i12i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
842Ie6nd52I12I:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
852Ie6nd52I22I:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
862je6nd52j12j:5-100Ribosomal_S10304 → 304.44 → 304.44.1
872ke6nd52k12k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
882le6nd52l12l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
892me6nd52m12m:3-124Ribosomal_S13102 → 102.2 → 102.2.1
902ne6nd52n12n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
912Ne6nd52N12N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
922oe6nd52o12o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
932Oe6nd52O12O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
942pe6nd52p12p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
952Pe6nd52P12P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
962qe6nd52q12q:2-100Ribosomal_S172 → 2.1 → 2.1.1
972Qe6nd52Q12Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
982re6nd52r12r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
992Re6nd52R12R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
1002se6nd52s12s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
1012Se6nd52S12S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
1022te6nd52t12t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
1032Te6nd52T12T:1-131Ribosomal_L194 → 4.1 → 4.1.1
1042Ue6nd52U12U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
1052Ve6nd52V12V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
1062We6nd52W12W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
1072Xe6nd52X12X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
1082Ye6nd52Y12Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
1092Ze6nd52Z12Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
1102Ze6nd52Z22Z:93-174Ribosomal_TL5_C240 → 240.1 → 240.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors