ECODEvolutionary Classification of Protein Domains

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PDB 6NM9

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Bview chain

6 domains

e6nm9B1(B:810-1003,B:1176-1227)e6nm9B2(B:47-289)e6nm9B3(B:1004-1175)e6nm9B4(B:1-46,B:515-583,B:679-809)e6nm9B5(B:584-678)e6nm9B6(B:290-514)

Chain Dview chain

6 domains

e6nm9D1(D:1004-1175)e6nm9D2(D:47-289)e6nm9D3(D:290-514)e6nm9D4(D:810-1003,D:1176-1227)e6nm9D5(D:1-46,D:515-583,D:679-809)e6nm9D6(D:584-678)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	B	e6nm9B1	B:810-1003,B:1176-1227	RuvC_1	2484 → 2484.1 → 2484.1.1
2	B	e6nm9B2	B:47-289	REC1	1070 → 1070.1 → 1070.1.1
3	B	e6nm9B3	B:1004-1175	NUC	1068 → 1068.1 → 1068.1.1
4	B	e6nm9B4	B:1-46,B:515-583,B:679-809	2.21.1.0	2 → 2.21 → 2.21.1
5	B	e6nm9B5	B:584-678	Cpf1_PI-like	1069 → 1069.1 → 1069.1.1
6	B	e6nm9B6	B:290-514	cas_Cpf1_2nd	1071 → 1071.1 → 1071.1.1
7	D	e6nm9D1	D:1004-1175	NUC	1068 → 1068.1 → 1068.1.1
8	D	e6nm9D2	D:47-289	REC1	1070 → 1070.1 → 1070.1.1
9	D	e6nm9D3	D:290-514	cas_Cpf1_2nd	1071 → 1071.1 → 1071.1.1
10	D	e6nm9D4	D:810-1003,D:1176-1227	RuvC_1	2484 → 2484.1 → 2484.1.1
11	D	e6nm9D5	D:1-46,D:515-583,D:679-809	2.21.1.0	2 → 2.21 → 2.21.1
12	D	e6nm9D6	D:584-678	Cpf1_PI-like	1069 → 1069.1 → 1069.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors