ECODEvolutionary Classification of Protein Domains

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PDB 6OQ5

X-RAY DIFFRACTION3.87 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

9 domains

e6oq5A6(A:1835-1968)e6oq5A1(A:2-91)e6oq5A4(A:847-1031)e6oq5A5(A:1048-1834)e6oq5A7(A:1969-2110)e6oq5A8(A:2111-2234)e6oq5A9(A:2235-2367)e6oq5A3(A:546-844)e6oq5A2(A:92-543)

Chain Dview chain

1 domain

e6oq5D1(D:0-125)

Chain Eview chain

1 domain

e6oq5E1(E:4-110)

Chain Fview chain

1 domain

e6oq5F1(F:1-116)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6oq5A6	A:1835-1968	Choline_bind_1	702 → 702.1 → 702.1.1
2	A	e6oq5A1	A:2-91	TcdB_N	633 → 633.16 → 633.16.1
3	A	e6oq5A4	A:847-1031	TcdA_TcdB_pore	1032 → 1032.1 → 1032.1.1
4	A	e6oq5A5	A:1048-1834	TcdA_TcdB_pore, PF30720	1033 → 1033.1 → 1033.1.1
5	A	e6oq5A7	A:1969-2110	702.1.1.4	702 → 702.1 → 702.1.1
6	A	e6oq5A8	A:2111-2234	Choline_bind_1	702 → 702.1 → 702.1.1
7	A	e6oq5A9	A:2235-2367	702.1.1.4	702 → 702.1 → 702.1.1
8	A	e6oq5A3	A:546-844	Peptidase_C80	7575 → 7575.1 → 7575.1.1
9	A	e6oq5A2	A:92-543	TcdA_TcdB	7516 → 7516.1 → 7516.1.1
10	D	e6oq5D1	D:0-125	V-set	11 → 11.1 → 11.1.1
11	E	e6oq5E1	E:4-110	V-set	11 → 11.1 → 11.1.1
12	F	e6oq5F1	F:1-116	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors