PDB 6OVY
X-RAY DIFFRACTION3.00 Å0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
12 domainsChain Eview chain
1 domainChain Fview chain
3 domainsAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6ovyA1 | A:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e6ovyA2 | A:4-49,A:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e6ovyB1 | B:7-49,B:173-228 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e6ovyB2 | B:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e6ovyC1 | C:663-700,C:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 6 | C | e6ovyC2 | C:999-1118 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 7 | C | e6ovyC3 | C:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 8 | C | e6ovyC5 | C:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 9 | C | e6ovyC6 | C:1-141,C:331-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | C | e6ovyC7 | C:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 11 | C | e6ovyC8 | C:142-330 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | D | e6ovyD1 | D:396-448 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e6ovyD2 | D:166-207,D:390-395 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e6ovyD3 | D:610-653,D:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e6ovyD4 | D:208-215,D:341-389 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 16 | D | e6ovyD5 | D:216-340 | RPOC_hybrid | 325 → 325.1 → 325.1.6 |
| 17 | D | e6ovyD6 | D:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 18 | D | e6ovyD7 | D:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 19 | D | e6ovyD8 | D:4-165,D:449-609 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 20 | D | e6ovyD9 | D:1201-1269,D:1331-1502 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 21 | D | e6ovyD10 | D:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 22 | D | e6ovyD11 | D:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 23 | D | e6ovyD12 | D:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 24 | E | e6ovyE1 | E:2-95 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 25 | F | e6ovyF1 | F:318-422 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 26 | F | e6ovyF2 | F:78-257 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 27 | F | e6ovyF3 | F:258-317 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors