ECODEvolutionary Classification of Protein Domains

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PDB 6PKU

X-RAY DIFFRACTION1.95 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

3 domains

e6pkuA01(A:127-149,A:181-183,A:212-214,A:228-237,A:292-326)e6pkuA02(A:150-180,A:184-201)e6pkuA03(A:202-211,A:215-227,A:238-291)

Chain Bview chain

3 domains

e6pkuB1(B:100-122,B:154-156,B:185-187,B:201-210,B:265-299)e6pkuB2(B:123-153,B:157-174)e6pkuB3(B:175-184,B:188-200,B:211-264)

Chain Cview chain

3 domains

e6pkuC1(C:100-122,C:154-156,C:185-187,C:201-210,C:265-299)e6pkuC2(C:123-153,C:157-174)e6pkuC3(C:175-184,C:188-200,C:211-264)

Chain Dview chain

3 domains

e6pkuD1(D:100-122,D:154-156,D:185-187,D:201-210,D:265-299)e6pkuD2(D:123-153,D:157-174)e6pkuD3(D:175-184,D:188-200,D:211-264)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6pkuA01	A:127-149,A:181-183,A:212-214,A:228-237,A:292-326	4187.2.1.0	4187 → 4187.2 → 4187.2.1
2	A	e6pkuA02	A:150-180,A:184-201	4187.2.1.0	4187 → 4187.2 → 4187.2.1
3	A	e6pkuA03	A:202-211,A:215-227,A:238-291	NAGPA	4187 → 4187.2 → 4187.2.1
4	B	e6pkuB1	B:100-122,B:154-156,B:185-187,B:201-210,B:265-299	4187.2.1.0	4187 → 4187.2 → 4187.2.1
5	B	e6pkuB2	B:123-153,B:157-174	4187.2.1.0	4187 → 4187.2 → 4187.2.1
6	B	e6pkuB3	B:175-184,B:188-200,B:211-264	NAGPA	4187 → 4187.2 → 4187.2.1
7	C	e6pkuC1	C:100-122,C:154-156,C:185-187,C:201-210,C:265-299	4187.2.1.0	4187 → 4187.2 → 4187.2.1
8	C	e6pkuC2	C:123-153,C:157-174	4187.2.1.0	4187 → 4187.2 → 4187.2.1
9	C	e6pkuC3	C:175-184,C:188-200,C:211-264	NAGPA	4187 → 4187.2 → 4187.2.1
10	D	e6pkuD1	D:100-122,D:154-156,D:185-187,D:201-210,D:265-299	4187.2.1.0	4187 → 4187.2 → 4187.2.1
11	D	e6pkuD2	D:123-153,D:157-174	4187.2.1.0	4187 → 4187.2 → 4187.2.1
12	D	e6pkuD3	D:175-184,D:188-200,D:211-264	NAGPA	4187 → 4187.2 → 4187.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors