PDB 6RXT
ELECTRON MICROSCOPY0 chains75 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Caview chain
2 domainsChain CAview chain
1 domainChain CBview chain
1 domainChain Ccview chain
1 domainChain CDview chain
3 domainsChain Ceview chain
2 domainsChain CEview chain
1 domainChain CFview chain
1 domainChain Cgview chain
1 domainChain CGview chain
1 domainChain Chview chain
1 domainChain CHview chain
2 domainsChain Ciview chain
1 domainChain CIview chain
5 domainsChain Cjview chain
1 domainChain CJview chain
1 domainChain CKview chain
1 domainChain Clview chain
1 domainChain Cmview chain
2 domainsChain CMview chain
2 domainsChain Cnview chain
1 domainChain CNview chain
1 domainChain COview chain
1 domainChain Cpview chain
1 domainChain CPview chain
2 domainsChain CQview chain
2 domainsChain CRview chain
4 domainsChain CSview chain
4 domainsChain CXview chain
1 domainChain UAview chain
3 domainsChain UEview chain
1 domainChain UFview chain
1 domainChain UGview chain
1 domainChain UIview chain
1 domainChain UJview chain
1 domainChain ULview chain
3 domainsChain UOview chain
1 domainChain UQview chain
1 domainChain UUview chain
3 domainsChain UXview chain
1 domainChain UZview chain
2 domainsAll Domains (75)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | Ca | e6rxtCa1 | Ca:8-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 2 | Ca | e6rxtCa2 | Ca:114-232 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 3 | CA | e6rxtCA1 | CA:64-313 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 4 | CB | e6rxtCB1 | CB:72-308 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 5 | Cc | e6rxtCc1 | Cc:13-212 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 6 | CC | e6rxtCC1 | CC:291-331,CC:372-421 | Nop | 102 → 102.1 → 102.1.4 |
| 7 | CC | e6rxtCC2 | CC:3-170 | NOP5NT | 3407 → 3407.1 → 3407.1.1 |
| 8 | CC | e6rxtCC3 | CC:171-301 | Nop | 606 → 606.1 → 606.1.1 |
| 9 | CD | e6rxtCD1 | CD:1-177 | NOP5NT | 3407 → 3407.1 → 3407.1.1 |
| 10 | CD | e6rxtCD2 | CD:178-307 | Nop | 102 → 102.1 → 102.1.4 |
| 11 | CD | e6rxtCD3 | CD:308-410 | Nop | 102 → 102.1 → 102.1.4 |
| 12 | Ce | e6rxtCe1 | Ce:15-103 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 13 | Ce | e6rxtCe2 | Ce:128-197 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 14 | CE | e6rxtCE1 | CE:6-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 15 | CF | e6rxtCF1 | CF:7-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 16 | Cg | e6rxtCg1 | Cg:18-176 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 17 | CG | e6rxtCG1 | CG:147-201,CG:234-439,CG:460-504,CG:555-608 | WD40 | 5 → 5.1 → 5.1.4 |
| 18 | Ch | e6rxtCh1 | Ch:86-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 19 | CH | e6rxtCH1 | CH:209-325 | RTC_insert | 2485 → 2485.2 → 2485.2.1 |
| 20 | CH | e6rxtCH2 | CH:7-208,CH:325-411 | RTC | 328 → 328.6 → 328.6.1 |
| 21 | Ci | e6rxtCi1 | Ci:25-139 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 22 | CI | e6rxtCI1 | CI:54-236 | MMR_HSR1 | 2004 → 2004.1 → 2004.1.1 |
| 23 | CI | e6rxtCI2 | CI:237-303,CI:772-805 | AARP2CN | 1 → 1.1 → 1.1.7 |
| 24 | CI | e6rxtCI3 | CI:806-917 | RIBIOP_C | 1 → 1.1 → 1.1.7 |
| 25 | CI | e6rxtCI4 | CI:918-956 | RIBIOP_C | 1 → 1.1 → 1.1.7 |
| 26 | CI | e6rxtCI5 | CI:957-992 | RIBIOP_C | 1 → 1.1 → 1.1.8 |
| 27 | Cj | e6rxtCj1 | Cj:3-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 28 | CJ | e6rxtCJ1 | CJ:2-180 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 29 | CK | e6rxtCK1 | CK:83-274 | Brix | 7502 → 7502.1 → 7502.1.1 |
| 30 | Cl | e6rxtCl1 | Cl:2-81 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 31 | Cm | e6rxtCm1 | Cm:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 32 | Cm | e6rxtCm2 | Cm:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 33 | CM | e6rxtCM1 | CM:81-315 | WD40 | 5 → 5.1 → 5.1.5 |
| 34 | CM | e6rxtCM2 | CM:316-357 | 5.1.4.0 | 5 → 5.1 → 5.1.4 |
| 35 | Cn | e6rxtCn1 | Cn:43-144 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 36 | CN | e6rxtCN1 | CN:12-251 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 37 | CO | e6rxtCO1 | CO:24-252 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 38 | Cp | e6rxtCp1 | Cp:6-66 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 39 | CP | e6rxtCP1 | CP:18-117 | KH_8 | 327 → 327.11 → 327.11.2 |
| 40 | CP | e6rxtCP2 | CP:118-222 | KRR1-like_KH2 | 327 → 327.11 → 327.11.2 |
| 41 | CQ | e6rxtCQ1 | CQ:162-259 | KH_PNO1_2nd | 327 → 327.11 → 327.11.2 |
| 42 | CQ | e6rxtCQ2 | CQ:80-161 | 327.11.2.0 | 327 → 327.11 → 327.11.2 |
| 43 | CR | e6rxtCR1 | CR:503-663,CR:703-833 | GNAT_acetyltr_2 | 213 → 213.1 → 213.1.1 |
| 44 | CR | e6rxtCR2 | CR:2-211 | TmcA_N | 2004 → 2004.1 → 2004.1.1 |
| 45 | CR | e6rxtCR3 | CR:212-223,CR:249-326,CR:365-434,CR:469-502 | Helicase_RecD | 2004 → 2004.1 → 2004.1.1 |
| 46 | CR | e6rxtCR4 | CR:834-924 | tRNA_bind_2 | 101 → 101.1 → 101.1.1 |
| 47 | CS | e6rxtCS1 | CS:503-663,CS:703-833 | GNAT_acetyltr_2 | 213 → 213.1 → 213.1.1 |
| 48 | CS | e6rxtCS2 | CS:2-211 | TmcA_N | 2004 → 2004.1 → 2004.1.1 |
| 49 | CS | e6rxtCS3 | CS:212-223,CS:249-326,CS:365-434,CS:469-502 | Helicase_RecD | 2004 → 2004.1 → 2004.1.1 |
| 50 | CS | e6rxtCS4 | CS:834-924 | tRNA_bind_2 | 101 → 101.1 → 101.1.1 |
| 51 | CX | e6rxtCX1 | CX:193-459 | Bystin | 109 → 109.4 → 109.4.1 |
| 52 | UA | e6rxtUA1 | UA:730-847 | Utp12 | 109 → 109.54 → 109.54.1 |
| 53 | UA | e6rxtUA2 | UA:338-729 | WD40 | 5 → 5.1 → 5.1.4 |
| 54 | UA | e6rxtUA3 | UA:1-338 | WD40 | 5 → 5.1 → 5.1.4 |
| 55 | UD | e6rxtUD1 | UD:368-578,UD:610-775,UD:797-884 | 5.1.4.0 | 5 → 5.1 → 5.1.4 |
| 56 | UD | e6rxtUD2 | UD:1-367 | WD40 | 5 → 5.1 → 5.1.4 |
| 57 | UE | e6rxtUE1 | UE:153-280 | Utp12 | 109 → 109.54 → 109.54.1 |
| 58 | UF | e6rxtUF1 | UF:2-196,UF:272-409 | U3_assoc_6, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 59 | UG | e6rxtUG1 | UG:153-464 | WD40,BING4CT | 5 → 5.1 → 5.1.5 |
| 60 | UI | e6rxtUI1 | UI:153-280 | Utp12 | 109 → 109.54 → 109.54.1 |
| 61 | UJ | e6rxtUJ1 | UJ:3-458 | U3snoRNP10 | 109 → 109.4 → 109.4.1 |
| 62 | UL | e6rxtUL1 | UL:5-161,UL:187-308,UL:352-420 | WD40, Beta-prop_WDR3_1st | 5 → 5.1 → 5.1.4 |
| 63 | UL | e6rxtUL2 | UL:421-724 | WD40, Beta-prop_WDR3_2nd | 5 → 5.1 → 5.1.4 |
| 64 | UL | e6rxtUL3 | UL:777-932 | Utp12 | 109 → 109.54 → 109.54.1 |
| 65 | UM | e6rxtUM1 | UM:723-894 | Utp13 | 109 → 109.54 → 109.54.1 |
| 66 | UM | e6rxtUM2 | UM:365-722 | WD40 | 5 → 5.1 → 5.1.4 |
| 67 | UM | e6rxtUM3 | UM:11-165,UM:197-350 | WD40 | 5 → 5.1 → 5.1.4 |
| 68 | UO | e6rxtUO1 | UO:42-350 | WD40 | 5 → 5.1 → 5.1.5 |
| 69 | UQ | e6rxtUQ1 | UQ:347-433,UQ:528-819 | WD40, Beta-prop_WDR75_1st | 5 → 5.1 → 5.1.5 |
| 70 | UU | e6rxtUU1 | UU:386-582,UU:614-793,UU:840-843 | WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd | 5 → 5.1 → 5.1.4 |
| 71 | UU | e6rxtUU2 | UU:31-385 | Beta-prop_WDR36-Utp21_1st | 5 → 5.1 → 5.1.4 |
| 72 | UU | e6rxtUU3 | UU:844-867,UU:923-1049 | Utp21 | 109 → 109.54 → 109.54.1 |
| 73 | UX | e6rxtUX01 | UX:91-169 | Fcf1 | 2006 → 2006.1 → 2006.1.4 |
| 74 | UZ | e6rxtUZ2 | UZ:18-36,UZ:58-88,UZ:232-295 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 75 | UZ | e6rxtUZ3 | UZ:89-186 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors