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PDB 6RXT

ELECTRON MICROSCOPY0 chains75 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (75)

#ChainDomain IDRangeFamilyClassification
1Cae6rxtCa1Ca:8-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
2Cae6rxtCa2Ca:114-232Ribosomal_S3Ae230 → 230.6 → 230.6.1
3CAe6rxtCA1CA:64-313Fibrillarin2003 → 2003.1 → 2003.1.5
4CBe6rxtCB1CB:72-308Fibrillarin2003 → 2003.1 → 2003.1.5
5Cce6rxtCc1Cc:13-212Ribosomal_S7167 → 167.1 → 167.1.1
6CCe6rxtCC1CC:291-331,CC:372-421Nop102 → 102.1 → 102.1.4
7CCe6rxtCC2CC:3-170NOP5NT3407 → 3407.1 → 3407.1.1
8CCe6rxtCC3CC:171-301Nop606 → 606.1 → 606.1.1
9CDe6rxtCD1CD:1-177NOP5NT3407 → 3407.1 → 3407.1.1
10CDe6rxtCD2CD:178-307Nop102 → 102.1 → 102.1.4
11CDe6rxtCD3CD:308-410Nop102 → 102.1 → 102.1.4
12Cee6rxtCe1Ce:15-103Ribosomal_S7e327 → 327.18 → 327.18.1
13Cee6rxtCe2Ce:128-197Ribosomal_S7e327 → 327.18 → 327.18.1
14CEe6rxtCE1CE:6-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
15CFe6rxtCF1CF:7-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
16Cge6rxtCg1Cg:18-176Ribosomal_S4,S4221 → 221.1 → 221.1.2
17CGe6rxtCG1CG:147-201,CG:234-439,CG:460-504,CG:555-608WD405 → 5.1 → 5.1.4
18Che6rxtCh1Ch:86-151Ribosomal_S15616 → 616.1 → 616.1.1
19CHe6rxtCH1CH:209-325RTC_insert2485 → 2485.2 → 2485.2.1
20CHe6rxtCH2CH:7-208,CH:325-411RTC328 → 328.6 → 328.6.1
21Cie6rxtCi1Ci:25-139Ribosomal_S112484 → 2484.1 → 2484.1.1
22CIe6rxtCI1CI:54-236MMR_HSR12004 → 2004.1 → 2004.1.1
23CIe6rxtCI2CI:237-303,CI:772-805AARP2CN1 → 1.1 → 1.1.7
24CIe6rxtCI3CI:806-917RIBIOP_C1 → 1.1 → 1.1.7
25CIe6rxtCI4CI:918-956RIBIOP_C1 → 1.1 → 1.1.7
26CIe6rxtCI5CI:957-992RIBIOP_C1 → 1.1 → 1.1.8
27Cje6rxtCj1Cj:3-128Ribosomal_S9212 → 212.1 → 212.1.1
28CJe6rxtCJ1CJ:2-180Ribosomal_S4,S4221 → 221.1 → 221.1.2
29CKe6rxtCK1CK:83-274Brix7502 → 7502.1 → 7502.1.1
30Cle6rxtCl1Cl:2-81Ribosomal_S13102 → 102.2 → 102.2.1
31Cme6rxtCm1Cm:2-67Ribosomal_S8320 → 320.2 → 320.2.1
32Cme6rxtCm2Cm:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
33CMe6rxtCM1CM:81-315WD405 → 5.1 → 5.1.5
34CMe6rxtCM2CM:316-3575.1.4.05 → 5.1 → 5.1.4
35Cne6rxtCn1Cn:43-144Ribosom_S12_S232 → 2.1 → 2.1.1
36CNe6rxtCN1CN:12-251EMG12488 → 2488.1 → 2488.1.1
37COe6rxtCO1CO:24-252EMG12488 → 2488.1 → 2488.1.1
38Cpe6rxtCp1Cp:6-66Ribosomal_S28e2 → 2.1 → 2.1.1
39CPe6rxtCP1CP:18-117KH_8327 → 327.11 → 327.11.2
40CPe6rxtCP2CP:118-222KRR1-like_KH2327 → 327.11 → 327.11.2
41CQe6rxtCQ1CQ:162-259KH_PNO1_2nd327 → 327.11 → 327.11.2
42CQe6rxtCQ2CQ:80-161327.11.2.0327 → 327.11 → 327.11.2
43CRe6rxtCR1CR:503-663,CR:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
44CRe6rxtCR2CR:2-211TmcA_N2004 → 2004.1 → 2004.1.1
45CRe6rxtCR3CR:212-223,CR:249-326,CR:365-434,CR:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
46CRe6rxtCR4CR:834-924tRNA_bind_2101 → 101.1 → 101.1.1
47CSe6rxtCS1CS:503-663,CS:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
48CSe6rxtCS2CS:2-211TmcA_N2004 → 2004.1 → 2004.1.1
49CSe6rxtCS3CS:212-223,CS:249-326,CS:365-434,CS:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
50CSe6rxtCS4CS:834-924tRNA_bind_2101 → 101.1 → 101.1.1
51CXe6rxtCX1CX:193-459Bystin109 → 109.4 → 109.4.1
52UAe6rxtUA1UA:730-847Utp12109 → 109.54 → 109.54.1
53UAe6rxtUA2UA:338-729WD405 → 5.1 → 5.1.4
54UAe6rxtUA3UA:1-338WD405 → 5.1 → 5.1.4
55UDe6rxtUD1UD:368-578,UD:610-775,UD:797-8845.1.4.05 → 5.1 → 5.1.4
56UDe6rxtUD2UD:1-367WD405 → 5.1 → 5.1.4
57UEe6rxtUE1UE:153-280Utp12109 → 109.54 → 109.54.1
58UFe6rxtUF1UF:2-196,UF:272-409U3_assoc_6, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
59UGe6rxtUG1UG:153-464WD40,BING4CT5 → 5.1 → 5.1.5
60UIe6rxtUI1UI:153-280Utp12109 → 109.54 → 109.54.1
61UJe6rxtUJ1UJ:3-458U3snoRNP10109 → 109.4 → 109.4.1
62ULe6rxtUL1UL:5-161,UL:187-308,UL:352-420WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
63ULe6rxtUL2UL:421-724WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
64ULe6rxtUL3UL:777-932Utp12109 → 109.54 → 109.54.1
65UMe6rxtUM1UM:723-894Utp13109 → 109.54 → 109.54.1
66UMe6rxtUM2UM:365-722WD405 → 5.1 → 5.1.4
67UMe6rxtUM3UM:11-165,UM:197-350WD405 → 5.1 → 5.1.4
68UOe6rxtUO1UO:42-350WD405 → 5.1 → 5.1.5
69UQe6rxtUQ1UQ:347-433,UQ:528-819WD40, Beta-prop_WDR75_1st5 → 5.1 → 5.1.5
70UUe6rxtUU1UU:386-582,UU:614-793,UU:840-843WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
71UUe6rxtUU2UU:31-385Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
72UUe6rxtUU3UU:844-867,UU:923-1049Utp21109 → 109.54 → 109.54.1
73UXe6rxtUX01UX:91-169Fcf12006 → 2006.1 → 2006.1.4
74UZe6rxtUZ2UZ:18-36,UZ:58-88,UZ:232-295Ribosomal_L1898 → 898.1 → 898.1.1
75UZe6rxtUZ3UZ:89-186Ribosomal_L12007 → 2007.25 → 2007.25.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors