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PDB 6RXV

ELECTRON MICROSCOPY0 chains89 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (89)

#ChainDomain IDRangeFamilyClassification
1Cae6rxvCa1Ca:114-232Ribosomal_S3Ae230 → 230.6 → 230.6.1
2Cae6rxvCa2Ca:8-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
3CAe6rxvCA1CA:64-313Fibrillarin2003 → 2003.1 → 2003.1.5
4Cbe6rxvCb1Cb:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
5Cbe6rxvCb2Cb:176-239KOW,40S_S4_C4 → 4.1 → 4.1.1
6Cbe6rxvCb3Cb:8-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
7CBe6rxvCB1CB:72-308Fibrillarin2003 → 2003.1 → 2003.1.5
8Cce6rxvCc1Cc:13-212Ribosomal_S7167 → 167.1 → 167.1.1
9CCe6rxvCC1CC:171-301Nop606 → 606.1 → 606.1.1
10CCe6rxvCC2CC:3-170NOP5NT3407 → 3407.1 → 3407.1.1
11CCe6rxvCC3CC:291-331,CC:372-421Nop102 → 102.1 → 102.1.4
12Cde6rxvCd1Cd:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
13CDe6rxvCD1CD:1-177NOP5NT3407 → 3407.1 → 3407.1.1
14CDe6rxvCD2CD:178-307Nop102 → 102.1 → 102.1.4
15CDe6rxvCD3CD:308-410Nop102 → 102.1 → 102.1.4
16Cee6rxvCe1Ce:128-197Ribosomal_S7e327 → 327.18 → 327.18.1
17Cee6rxvCe2Ce:15-103Ribosomal_S7e327 → 327.18 → 327.18.1
18CEe6rxvCE1CE:6-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
19Cfe6rxvCf1Cf:2-123,Cf:151-202Ribosomal_S8e3174 → 3174.1 → 3174.1.1
20CFe6rxvCF1CF:7-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
21Cge6rxvCg1Cg:18-176Ribosomal_S4,S4221 → 221.1 → 221.1.2
22CGe6rxvCG1CG:152-201,CG:234-369,CG:394-439,CG:460-505,CG:556-608WD405 → 5.1 → 5.1.4
23Che6rxvCh1Ch:86-151Ribosomal_S15616 → 616.1 → 616.1.1
24CHe6rxvCH1CH:209-325RTC_insert2485 → 2485.2 → 2485.2.1
25CHe6rxvCH2CH:7-208,CH:325-411RTC328 → 328.6 → 328.6.1
26Cie6rxvCi1Ci:25-139Ribosomal_S112484 → 2484.1 → 2484.1.1
27CIe6rxvCI1CI:54-236MMR_HSR12004 → 2004.1 → 2004.1.1
28CIe6rxvCI2CI:237-303,CI:772-805AARP2CN1 → 1.1 → 1.1.7
29CIe6rxvCI3CI:806-917RIBIOP_C1 → 1.1 → 1.1.7
30CIe6rxvCI4CI:918-956RIBIOP_C1 → 1.1 → 1.1.7
31CIe6rxvCI5CI:957-992RIBIOP_C1 → 1.1 → 1.1.8
32Cje6rxvCj1Cj:3-128Ribosomal_S9212 → 212.1 → 212.1.1
33CJe6rxvCJ1CJ:2-180Ribosomal_S4,S4221 → 221.1 → 221.1.2
34Cke6rxvCk1Ck:11-161Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
35CKe6rxvCK1CK:83-274Brix7502 → 7502.1 → 7502.1.1
36Cle6rxvCl1Cl:2-81Ribosomal_S13102 → 102.2 → 102.2.1
37Cme6rxvCm1Cm:2-67Ribosomal_S8320 → 320.2 → 320.2.1
38Cme6rxvCm2Cm:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
39CMe6rxvCM1CM:81-315WD405 → 5.1 → 5.1.5
40CMe6rxvCM2CM:316-3575.1.4.05 → 5.1 → 5.1.4
41Cne6rxvCn1Cn:43-144Ribosom_S12_S232 → 2.1 → 2.1.1
42CNe6rxvCN1CN:12-251EMG12488 → 2488.1 → 2488.1.1
43Coe6rxvCo1Co:336-427Ribosomal_S24e304 → 304.109 → 304.109.1
44COe6rxvCO1CO:24-252EMG12488 → 2488.1 → 2488.1.1
45Cpe6rxvCp1Cp:6-66Ribosomal_S28e2 → 2.1 → 2.1.1
46CPe6rxvCP1CP:118-209KRR1-like_KH2327 → 327.11 → 327.11.2
47CPe6rxvCP2CP:36-117KH_8327 → 327.11 → 327.11.2
48CQe6rxvCQ1CQ:162-259KH_PNO1_2nd327 → 327.11 → 327.11.2
49CQe6rxvCQ2CQ:80-161327.11.2.0327 → 327.11 → 327.11.2
50CRe6rxvCR1CR:503-663,CR:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
51CRe6rxvCR2CR:2-211TmcA_N2004 → 2004.1 → 2004.1.1
52CRe6rxvCR3CR:212-223,CR:249-326,CR:365-434,CR:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
53CRe6rxvCR4CR:834-924tRNA_bind_2101 → 101.1 → 101.1.1
54CSe6rxvCS1CS:503-663,CS:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
55CSe6rxvCS2CS:2-211TmcA_N2004 → 2004.1 → 2004.1.1
56CSe6rxvCS3CS:212-223,CS:249-326,CS:365-434,CS:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
57CSe6rxvCS4CS:834-924tRNA_bind_2101 → 101.1 → 101.1.1
58CVe6rxvCV1CV:30-103,CV:145-218RRM_Rrp7304 → 304.9 → 304.9.1
59CWe6rxvCW1CW:2-383Beta-prop_NOL10_N5 → 5.1 → 5.1.5
60CXe6rxvCX1CX:193-459Bystin109 → 109.4 → 109.4.1
61UAe6rxvUA1UA:730-847Utp12109 → 109.54 → 109.54.1
62UAe6rxvUA2UA:338-729WD405 → 5.1 → 5.1.4
63UAe6rxvUA3UA:1-338WD405 → 5.1 → 5.1.4
64UDe6rxvUD1UD:368-578,UD:610-775,UD:797-8845.1.4.05 → 5.1 → 5.1.4
65UDe6rxvUD2UD:1-367WD405 → 5.1 → 5.1.4
66UEe6rxvUE1UE:153-280Utp12109 → 109.54 → 109.54.1
67UFe6rxvUF1UF:2-196,UF:272-409U3_assoc_6, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
68UGe6rxvUG1UG:153-464WD40,BING4CT5 → 5.1 → 5.1.5
69UIe6rxvUI1UI:153-280Utp12109 → 109.54 → 109.54.1
70UJe6rxvUJ1UJ:1643-1801109.4.1.0109 → 109.4 → 109.4.1
71ULe6rxvUL1UL:777-931Utp12109 → 109.54 → 109.54.1
72UMe6rxvUM1UM:723-894Utp13109 → 109.54 → 109.54.1
73UMe6rxvUM2UM:365-722WD405 → 5.1 → 5.1.4
74UMe6rxvUM3UM:11-165,UM:197-350WD405 → 5.1 → 5.1.4
75UOe6rxvUO1UO:42-350WD405 → 5.1 → 5.1.5
76UQe6rxvUQ1UQ:93-266,UQ:288-435,UQ:919-952Beta-prop_WDR75_1st5 → 5.1 → 5.1.5
77UTe6rxvUT1UT:1294-1522,UT:1571-1656,UT:1684-1827,UT:1849-1924,UT:1946-2228109.4.1.92109 → 109.4 → 109.4.1
78UUe6rxvUU1UU:844-867,UU:923-1049Utp21109 → 109.54 → 109.54.1
79UUe6rxvUU2UU:386-582,UU:614-793,UU:840-843WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
80UUe6rxvUU3UU:31-385Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
81UVe6rxvUV1UV:439-618Nrap_D3304 → 304.20 → 304.20.1
82UVe6rxvUV2UV:987-1111Nrap_D6304 → 304.20 → 304.20.1
83UVe6rxvUV3UV:619-823Nrap_D4316 → 316.1 → 316.1.1
84UVe6rxvUV4UV:34-293Nrap316 → 316.1 → 316.1.1
85UVe6rxvUV5UV:294-438Nrap_D2102 → 102.1 → 102.1.3
86UVe6rxvUV6UV:824-986Nrap_D5102 → 102.1 → 102.1.3
87UXe6rxvUX1UX:100-178Fcf12006 → 2006.1 → 2006.1.4
88UZe6rxvUZ1UZ:18-36,UZ:58-88,UZ:232-295Ribosomal_L1898 → 898.1 → 898.1.1
89UZe6rxvUZ2UZ:89-186Ribosomal_L12007 → 2007.25 → 2007.25.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors