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PDB 6RXX

ELECTRON MICROSCOPY0 chains94 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (94)

#ChainDomain IDRangeFamilyClassification
1Cae6rxxCa1Ca:114-232Ribosomal_S3Ae230 → 230.6 → 230.6.1
2Cae6rxxCa2Ca:8-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
3CAe6rxxCA1CA:64-313Fibrillarin2003 → 2003.1 → 2003.1.5
4Cbe6rxxCb1Cb:176-239KOW,40S_S4_C4 → 4.1 → 4.1.1
5Cbe6rxxCb2Cb:8-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
6Cbe6rxxCb3Cb:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
7CBe6rxxCB1CB:72-308Fibrillarin2003 → 2003.1 → 2003.1.5
8Cce6rxxCc1Cc:13-212Ribosomal_S7167 → 167.1 → 167.1.1
9CCe6rxxCC1CC:291-331,CC:372-421Nop102 → 102.1 → 102.1.4
10CCe6rxxCC2CC:171-301Nop606 → 606.1 → 606.1.1
11CCe6rxxCC3CC:3-170NOP5NT3407 → 3407.1 → 3407.1.1
12Cde6rxxCd1Cd:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
13CDe6rxxCD1CD:1-177NOP5NT3407 → 3407.1 → 3407.1.1
14CDe6rxxCD2CD:178-307Nop102 → 102.1 → 102.1.4
15CDe6rxxCD3CD:308-410Nop102 → 102.1 → 102.1.4
16Cee6rxxCe1Ce:15-103Ribosomal_S7e327 → 327.18 → 327.18.1
17Cee6rxxCe2Ce:128-197Ribosomal_S7e327 → 327.18 → 327.18.1
18CEe6rxxCE1CE:6-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
19Cfe6rxxCf1Cf:2-123,Cf:151-202Ribosomal_S8e3174 → 3174.1 → 3174.1.1
20CFe6rxxCF1CF:7-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
21Cge6rxxCg1Cg:18-176Ribosomal_S4,S4221 → 221.1 → 221.1.2
22CGe6rxxCG1CG:145-201,CG:223-507,CG:556-608WD405 → 5.1 → 5.1.4
23Che6rxxCh1Ch:83-151Ribosomal_S15616 → 616.1 → 616.1.1
24Che6rxxCh2Ch:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
25CHe6rxxCH1CH:209-325RTC_insert2485 → 2485.2 → 2485.2.1
26CHe6rxxCH2CH:7-208,CH:325-411RTC328 → 328.6 → 328.6.1
27Cie6rxxCi1Ci:25-139Ribosomal_S112484 → 2484.1 → 2484.1.1
28CIe6rxxCI1CI:54-236MMR_HSR12004 → 2004.1 → 2004.1.1
29CIe6rxxCI2CI:237-303,CI:772-805AARP2CN1 → 1.1 → 1.1.7
30CIe6rxxCI3CI:806-917RIBIOP_C1 → 1.1 → 1.1.7
31CIe6rxxCI4CI:918-956RIBIOP_C1 → 1.1 → 1.1.7
32CIe6rxxCI5CI:957-992RIBIOP_C1 → 1.1 → 1.1.8
33Cje6rxxCj1Cj:3-128Ribosomal_S9212 → 212.1 → 212.1.1
34CJe6rxxCJ1CJ:2-180Ribosomal_S4,S4221 → 221.1 → 221.1.2
35Cke6rxxCk1Ck:11-161Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
36CKe6rxxCK1CK:83-274Brix7502 → 7502.1 → 7502.1.1
37Cle6rxxCl1Cl:2-81Ribosomal_S13102 → 102.2 → 102.2.1
38Cme6rxxCm1Cm:2-67Ribosomal_S8320 → 320.2 → 320.2.1
39Cme6rxxCm2Cm:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
40CMe6rxxCM1CM:81-315WD405 → 5.1 → 5.1.5
41CMe6rxxCM2CM:316-3575.1.4.05 → 5.1 → 5.1.4
42Cne6rxxCn1Cn:43-144Ribosom_S12_S232 → 2.1 → 2.1.1
43CNe6rxxCN1CN:12-251EMG12488 → 2488.1 → 2488.1.1
44Coe6rxxCo1Co:336-427Ribosomal_S24e304 → 304.109 → 304.109.1
45COe6rxxCO1CO:24-252EMG12488 → 2488.1 → 2488.1.1
46Cpe6rxxCp1Cp:6-66Ribosomal_S28e2 → 2.1 → 2.1.1
47CPe6rxxCP1CP:118-222KRR1-like_KH2327 → 327.11 → 327.11.2
48CPe6rxxCP2CP:18-117KH_8327 → 327.11 → 327.11.2
49Cqe6rxxCq1Cq:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
50CQe6rxxCQ1CQ:80-161327.11.2.0327 → 327.11 → 327.11.2
51CQe6rxxCQ2CQ:162-259KH_PNO1_2nd327 → 327.11 → 327.11.2
52Cre6rxxCr1Cr:3-144Ribosomal_S19e101 → 101.1 → 101.1.2
53CRe6rxxCR1CR:503-663,CR:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
54CRe6rxxCR2CR:2-211TmcA_N2004 → 2004.1 → 2004.1.1
55CRe6rxxCR3CR:212-223,CR:249-326,CR:365-434,CR:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
56CRe6rxxCR4CR:834-924tRNA_bind_2101 → 101.1 → 101.1.1
57CSe6rxxCS1CS:503-663,CS:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
58CSe6rxxCS2CS:2-211TmcA_N2004 → 2004.1 → 2004.1.1
59CSe6rxxCS3CS:212-223,CS:249-326,CS:365-434,CS:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
60CSe6rxxCS4CS:834-924tRNA_bind_2101 → 101.1 → 101.1.1
61CVe6rxxCV1CV:30-103,CV:145-218RRM_Rrp7304 → 304.9 → 304.9.1
62CWe6rxxCW1CW:2-383Beta-prop_NOL10_N5 → 5.1 → 5.1.5
63CXe6rxxCX1CX:193-459Bystin109 → 109.4 → 109.4.1
64UAe6rxxUA1UA:1-338WD405 → 5.1 → 5.1.4
65UAe6rxxUA2UA:730-847Utp12109 → 109.54 → 109.54.1
66UAe6rxxUA3UA:338-729WD405 → 5.1 → 5.1.4
67UDe6rxxUD1UD:368-578,UD:610-775,UD:797-8845.1.4.05 → 5.1 → 5.1.4
68UDe6rxxUD2UD:1-367WD405 → 5.1 → 5.1.4
69UEe6rxxUE1UE:153-280Utp12109 → 109.54 → 109.54.1
70UFe6rxxUF1UF:2-196,UF:272-409U3_assoc_6, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
71UGe6rxxUG1UG:153-464WD40,BING4CT5 → 5.1 → 5.1.5
72UIe6rxxUI1UI:153-280Utp12109 → 109.54 → 109.54.1
73UJe6rxxUJ1UJ:3-458U3snoRNP10109 → 109.4 → 109.4.1
74UJe6rxxUJ2UJ:486-872109.4.1.0109 → 109.4 → 109.4.1
75UJe6rxxUJ3UJ:1643-1801109.4.1.0109 → 109.4 → 109.4.1
76ULe6rxxUL1UL:421-724WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
77ULe6rxxUL2UL:777-932Utp12109 → 109.54 → 109.54.1
78ULe6rxxUL3UL:5-161,UL:187-308,UL:352-420WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
79UMe6rxxUM1UM:723-894Utp13109 → 109.54 → 109.54.1
80UMe6rxxUM2UM:365-722WD405 → 5.1 → 5.1.4
81UMe6rxxUM3UM:11-165,UM:197-350WD405 → 5.1 → 5.1.4
82UOe6rxxUO1UO:42-350WD405 → 5.1 → 5.1.5
83UQe6rxxUQ1UQ:347-433,UQ:528-819WD40, Beta-prop_WDR75_1st5 → 5.1 → 5.1.5
84UTe6rxxUT1UT:1294-1522,UT:1571-1656,UT:1684-1827,UT:1849-1924,UT:1946-2228109.4.1.92109 → 109.4 → 109.4.1
85UUe6rxxUU1UU:31-385Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
86UUe6rxxUU2UU:844-867,UU:923-1049Utp21109 → 109.54 → 109.54.1
87UUe6rxxUU3UU:386-582,UU:614-793,UU:840-843WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
88UVe6rxxUV1UV:987-1111Nrap_D6304 → 304.20 → 304.20.1
89UVe6rxxUV2UV:34-293Nrap316 → 316.1 → 316.1.1
90UVe6rxxUV3UV:294-438Nrap_D2102 → 102.1 → 102.1.3
91UVe6rxxUV4UV:619-823Nrap_D4316 → 316.1 → 316.1.1
92UVe6rxxUV5UV:824-986Nrap_D5102 → 102.1 → 102.1.3
93UVe6rxxUV6UV:439-618Nrap_D3304 → 304.20 → 304.20.1
94UXe6rxxUX1UX:100-178Fcf12006 → 2006.1 → 2006.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors