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PDB 6RXZ

ELECTRON MICROSCOPY0 chains92 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (92)

#ChainDomain IDRangeFamilyClassification
1CAe6rxzCA1CA:64-313Fibrillarin2003 → 2003.1 → 2003.1.5
2Cbe6rxzCb1Cb:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
3Cbe6rxzCb2Cb:176-239KOW,40S_S4_C4 → 4.1 → 4.1.1
4Cbe6rxzCb3Cb:8-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
5CBe6rxzCB1CB:72-308Fibrillarin2003 → 2003.1 → 2003.1.5
6Cce6rxzCc1Cc:13-212Ribosomal_S7167 → 167.1 → 167.1.1
7CCe6rxzCC1CC:171-301Nop606 → 606.1 → 606.1.1
8CCe6rxzCC2CC:291-331,CC:372-421Nop102 → 102.1 → 102.1.4
9CCe6rxzCC3CC:3-170NOP5NT3407 → 3407.1 → 3407.1.1
10Cde6rxzCd1Cd:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
11CDe6rxzCD1CD:1-177NOP5NT3407 → 3407.1 → 3407.1.1
12CDe6rxzCD2CD:178-307Nop102 → 102.1 → 102.1.4
13CDe6rxzCD3CD:308-410Nop102 → 102.1 → 102.1.4
14Cee6rxzCe1Ce:15-103Ribosomal_S7e327 → 327.18 → 327.18.1
15Cee6rxzCe2Ce:128-197Ribosomal_S7e327 → 327.18 → 327.18.1
16CEe6rxzCE1CE:6-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
17Cfe6rxzCf1Cf:2-123,Cf:151-202Ribosomal_S8e3174 → 3174.1 → 3174.1.1
18CFe6rxzCF1CF:7-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
19Cge6rxzCg1Cg:18-176Ribosomal_S4,S4221 → 221.1 → 221.1.2
20CGe6rxzCG1CG:145-201,CG:223-507,CG:556-608WD405 → 5.1 → 5.1.4
21Che6rxzCh1Ch:86-134Ribosomal_S15616 → 616.1 → 616.1.1
22CHe6rxzCH1CH:7-208,CH:325-411RTC328 → 328.6 → 328.6.1
23CHe6rxzCH2CH:209-325RTC_insert2485 → 2485.2 → 2485.2.1
24Cie6rxzCi1Ci:25-139Ribosomal_S112484 → 2484.1 → 2484.1.1
25CIe6rxzCI1CI:54-236MMR_HSR12004 → 2004.1 → 2004.1.1
26CIe6rxzCI2CI:237-303,CI:772-805AARP2CN1 → 1.1 → 1.1.7
27CIe6rxzCI3CI:806-917RIBIOP_C1 → 1.1 → 1.1.7
28CIe6rxzCI4CI:918-956RIBIOP_C1 → 1.1 → 1.1.7
29CIe6rxzCI5CI:957-992RIBIOP_C1 → 1.1 → 1.1.8
30Cje6rxzCj1Cj:3-128Ribosomal_S9212 → 212.1 → 212.1.1
31CJe6rxzCJ1CJ:2-180Ribosomal_S4,S4221 → 221.1 → 221.1.2
32Cke6rxzCk1Ck:11-161Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
33CKe6rxzCK1CK:83-274Brix7502 → 7502.1 → 7502.1.1
34Cle6rxzCl1Cl:2-81Ribosomal_S13102 → 102.2 → 102.2.1
35Cme6rxzCm1Cm:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
36Cme6rxzCm2Cm:2-67Ribosomal_S8320 → 320.2 → 320.2.1
37CMe6rxzCM1CM:81-315WD405 → 5.1 → 5.1.5
38CMe6rxzCM2CM:316-3575.1.4.05 → 5.1 → 5.1.4
39Cne6rxzCn1Cn:43-144Ribosom_S12_S232 → 2.1 → 2.1.1
40CNe6rxzCN1CN:12-251EMG12488 → 2488.1 → 2488.1.1
41Coe6rxzCo1Co:336-427Ribosomal_S24e304 → 304.109 → 304.109.1
42COe6rxzCO1CO:24-252EMG12488 → 2488.1 → 2488.1.1
43Cpe6rxzCp1Cp:6-66Ribosomal_S28e2 → 2.1 → 2.1.1
44CPe6rxzCP1CP:118-222KRR1-like_KH2327 → 327.11 → 327.11.2
45CPe6rxzCP2CP:36-117KH_8327 → 327.11 → 327.11.2
46CQe6rxzCQ1CQ:162-259KH_PNO1_2nd327 → 327.11 → 327.11.2
47CQe6rxzCQ2CQ:80-161327.11.2.0327 → 327.11 → 327.11.2
48CRe6rxzCR1CR:503-663,CR:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
49CRe6rxzCR2CR:2-211TmcA_N2004 → 2004.1 → 2004.1.1
50CRe6rxzCR3CR:212-223,CR:249-326,CR:365-434,CR:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
51CRe6rxzCR4CR:834-924tRNA_bind_2101 → 101.1 → 101.1.1
52CSe6rxzCS1CS:503-663,CS:703-833GNAT_acetyltr_2213 → 213.1 → 213.1.1
53CSe6rxzCS2CS:2-211TmcA_N2004 → 2004.1 → 2004.1.1
54CSe6rxzCS3CS:212-223,CS:249-326,CS:365-434,CS:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
55CSe6rxzCS4CS:834-924tRNA_bind_2101 → 101.1 → 101.1.1
56CVe6rxzCV1CV:30-103,CV:145-218RRM_Rrp7304 → 304.9 → 304.9.1
57CWe6rxzCW1CW:2-383Beta-prop_NOL10_N5 → 5.1 → 5.1.5
58CXe6rxzCX1CX:193-459Bystin109 → 109.4 → 109.4.1
59Cze6rxzCz1Cz:1494-1768TPR_8, TPR_16, HAT_Syf1_CNRKL1_N, HAT_PRP39_N109 → 109.4 → 109.4.1
60UAe6rxzUA1UA:730-847Utp12109 → 109.54 → 109.54.1
61UAe6rxzUA2UA:1-338WD405 → 5.1 → 5.1.4
62UAe6rxzUA3UA:338-729WD405 → 5.1 → 5.1.4
63UDe6rxzUD1UD:368-578,UD:610-775,UD:797-8845.1.4.05 → 5.1 → 5.1.4
64UDe6rxzUD2UD:1-367WD405 → 5.1 → 5.1.4
65UEe6rxzUE1UE:153-280Utp12109 → 109.54 → 109.54.1
66UFe6rxzUF1UF:2-196,UF:272-409U3_assoc_6, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
67UGe6rxzUG1UG:153-464WD40,BING4CT5 → 5.1 → 5.1.5
68UIe6rxzUI1UI:153-280Utp12109 → 109.54 → 109.54.1
69UJe6rxzUJ1UJ:3-458U3snoRNP10109 → 109.4 → 109.4.1
70UJe6rxzUJ2UJ:486-872109.4.1.0109 → 109.4 → 109.4.1
71UJe6rxzUJ3UJ:1643-1801109.4.1.0109 → 109.4 → 109.4.1
72ULe6rxzUL1UL:421-724WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
73ULe6rxzUL2UL:5-161,UL:187-308,UL:352-420WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
74ULe6rxzUL3UL:777-932Utp12109 → 109.54 → 109.54.1
75UMe6rxzUM1UM:725-894Utp13109 → 109.54 → 109.54.1
76UMe6rxzUM2UM:11-31,UM:384-412,UM:435-488,UM:508-525,UM:545-724WD405 → 5.1 → 5.1.4
77UMe6rxzUM3UM:32-165,UM:195-284,UM:286-383WD405 → 5.1 → 5.1.4
78UOe6rxzUO1UO:42-350WD405 → 5.1 → 5.1.5
79UQe6rxzUQ1UQ:347-433,UQ:528-819WD40, Beta-prop_WDR75_1st5 → 5.1 → 5.1.5
80UTe6rxzUT1UT:1294-1522,UT:1571-1656,UT:1684-1827,UT:1849-1924,UT:1946-2246109.4.1.92109 → 109.4 → 109.4.1
81UUe6rxzUU1UU:844-867,UU:923-1049Utp21109 → 109.54 → 109.54.1
82UUe6rxzUU2UU:31-385Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
83UUe6rxzUU3UU:386-582,UU:614-793,UU:840-843WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
84UVe6rxzUV1UV:439-618Nrap_D3304 → 304.20 → 304.20.1
85UVe6rxzUV2UV:294-438Nrap_D2102 → 102.1 → 102.1.3
86UVe6rxzUV3UV:34-293Nrap316 → 316.1 → 316.1.1
87UVe6rxzUV4UV:824-986Nrap_D5102 → 102.1 → 102.1.3
88UVe6rxzUV5UV:619-823Nrap_D4316 → 316.1 → 316.1.1
89UVe6rxzUV6UV:987-1111Nrap_D6304 → 304.20 → 304.20.1
90UXe6rxzUX1UX:100-178Fcf12006 → 2006.1 → 2006.1.4
91UZe6rxzUZ2UZ:18-36,UZ:58-88,UZ:232-295Ribosomal_L1898 → 898.1 → 898.1.1
92UZe6rxzUZ3UZ:89-186Ribosomal_L12007 → 2007.25 → 2007.25.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors