ECODEvolutionary Classification of Protein Domains

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PDB 6S2E

ELECTRON MICROSCOPY0 chains11 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e6s2eA1(A:512-689,A:752-985)e6s2eA2(A:282-511)e6s2eA3(A:986-1186)e6s2eA4(A:31-89,A:112-138,A:250-281)e6s2eA5(A:136-212,A:242-249)

Chain Bview chain

5 domains

e6s2eB1(B:2-115)e6s2eB2(B:116-180)e6s2eB3(B:318-380)e6s2eB4(B:253-317)e6s2eB5(B:181-252)

Chain Dview chain

1 domain

e6s2eD1(D:2-133)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6s2eA1	A:512-689,A:752-985	DNA_pol_B	304 → 304.48 → 304.48.1
2	A	e6s2eA2	A:282-511	DNA_pol_B_exo1, DNA_pol_B_exo2	2484 → 2484.1 → 2484.1.1
3	A	e6s2eA3	A:986-1186	POL2_thumb	4969 → 4969.1 → 4969.1.1
4	A	e6s2eA4	A:31-89,A:112-138,A:250-281	2.1.1.0	2 → 2.1 → 2.1.1
5	A	e6s2eA5	A:136-212,A:242-249	304.114.1.0	304 → 304.114 → 304.114.1
6	B	e6s2eB1	B:2-115	Dcc1	59 → 59.1 → 59.1.1
7	B	e6s2eB2	B:116-180	Dcc1	101 → 101.1 → 101.1.2
8	B	e6s2eB3	B:318-380	Dcc1	101 → 101.1 → 101.1.2
9	B	e6s2eB4	B:253-317	Dcc1	101 → 101.1 → 101.1.2
10	B	e6s2eB5	B:181-252	Dcc1	101 → 101.1 → 101.1.2
11	D	e6s2eD1	D:2-133	Ctf8	59 → 59.1 → 59.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors