PDB 6TQO
ELECTRON MICROSCOPY0 chains40 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
6 domainsChain Bview chain
1 domainChain Cview chain
1 domainChain Eview chain
1 domainChain Gview chain
2 domainsChain Sview chain
2 domainsChain Tview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
1 domainChain Xview chain
10 domainsAll Domains (40)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6tqoA1 | A:126-199 | S1 | 2 → 2.1 → 2.1.1 |
| 2 | A | e6tqoA2 | A:1-127 | NusA_N | 885 → 885.1 → 885.1.1 |
| 3 | A | e6tqoA3 | A:199-278 | KH_5 | 327 → 327.11 → 327.11.1 |
| 4 | A | e6tqoA4 | A:279-346 | KH_NusA_2nd | 327 → 327.11 → 327.11.1 |
| 5 | A | e6tqoA5 | A:423-495 | HHH_5 | 102 → 102.1 → 102.1.1 |
| 6 | A | e6tqoA6 | A:345-422 | 102.1.1.0 | 102 → 102.1 → 102.1.1 |
| 7 | B | e6tqoB1 | B:4-137 | NusB | 195 → 195.1 → 195.1.1 |
| 8 | C | e6tqoC1 | C:2-206 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 9 | E | e6tqoE1 | E:2-103 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 10 | G | e6tqoG1 | G:4-46,G:67-123 | NusG | 304 → 304.17 → 304.17.1 |
| 11 | G | e6tqoG2 | G:123-181 | KOW | 4 → 4.1 → 4.1.1 |
| 12 | S | e6tqoS1 | S:142-266 | Inositol_P | 7587 → 7587.1 → 7587.1.1 |
| 13 | S | e6tqoS2 | S:0-141 | Inositol_P | 4018 → 4018.1 → 4018.1.1 |
| 14 | T | e6tqoT1 | T:142-263 | Inositol_P | 7587 → 7587.1 → 7587.1.1 |
| 15 | T | e6tqoT2 | T:1-141 | Inositol_P | 4018 → 4018.1 → 4018.1.1 |
| 16 | U | e6tqoU1 | U:4-52,U:179-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 17 | U | e6tqoU2 | U:237-325 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 18 | U | e6tqoU3 | U:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | V | e6tqoV1 | V:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 20 | V | e6tqoV2 | V:5-52,V:179-234 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 21 | W | e6tqoW1 | W:2-91 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 22 | X | e6tqoX1 | X:578-712 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 23 | X | e6tqoX2 | X:939-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 24 | X | e6tqoX3 | X:828-938,X:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 25 | X | e6tqoX4 | X:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 26 | X | e6tqoX5 | X:1240-1342 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 27 | X | e6tqoX6 | X:152-225,X:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 28 | X | e6tqoX7 | X:226-234,X:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 29 | X | e6tqoX8 | X:791-827,X:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 30 | X | e6tqoX9 | X:1-151,X:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 31 | X | e6tqoX10 | X:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 32 | Y | e6tqoY1 | Y:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 33 | Y | e6tqoY2 | Y:1023-1131 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 34 | Y | e6tqoY3 | Y:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 35 | Y | e6tqoY4 | Y:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 36 | Y | e6tqoY5 | Y:1132-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 37 | Y | e6tqoY6 | Y:16-341 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 38 | Y | e6tqoY7 | Y:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 39 | Y | e6tqoY8 | Y:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 40 | Y | e6tqoY9 | Y:895-931,Y:1214-1375 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors