PDB 6UU4
X-RAY DIFFRACTION4.30 Å0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain AAAview chain
2 domainsChain BBBview chain
2 domainsChain CCCview chain
10 domainsChain DDDview chain
9 domainsChain EEEview chain
1 domainAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AAA | e6uu4AAA1 | AAA:6-52,AAA:179-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | AAA | e6uu4AAA2 | AAA:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | BBB | e6uu4BBB1 | BBB:6-52,BBB:174-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | BBB | e6uu4BBB2 | BBB:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | CCC | e6uu4CCC1 | CCC:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 6 | CCC | e6uu4CCC2 | CCC:153-226,CCC:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | CCC | e6uu4CCC3 | CCC:578-714 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 8 | CCC | e6uu4CCC4 | CCC:791-828,CCC:1058-1237 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 9 | CCC | e6uu4CCC5 | CCC:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 10 | CCC | e6uu4CCC6 | CCC:1238-1342 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | CCC | e6uu4CCC7 | CCC:227-234,CCC:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 12 | CCC | e6uu4CCC8 | CCC:828-938 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | CCC | e6uu4CCC9 | CCC:3-152,CCC:450-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 14 | CCC | e6uu4CCC10 | CCC:939-1057 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 15 | DDD | e6uu4DDD1 | DDD:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 16 | DDD | e6uu4DDD2 | DDD:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 17 | DDD | e6uu4DDD3 | DDD:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 18 | DDD | e6uu4DDD4 | DDD:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 19 | DDD | e6uu4DDD5 | DDD:1023-1131 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 20 | DDD | e6uu4DDD6 | DDD:1132-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 21 | DDD | e6uu4DDD7 | DDD:895-931,DDD:1214-1376 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 22 | DDD | e6uu4DDD8 | DDD:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | DDD | e6uu4DDD9 | DDD:15-341 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 24 | EEE | e6uu4EEE1 | EEE:2-80 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 25 | FFF | e6uu4FFF1 | FFF:53-167 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 26 | FFF | e6uu4FFF2 | FFF:168-244 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 27 | FFF | e6uu4FFF3 | FFF:245-329 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors