ECODEvolutionary Classification of Protein Domains

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PDB 6VDE

X-RAY DIFFRACTION2.70 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

6 domains

e6vdeA1(A:504-674)e6vdeA2(A:675-822)e6vdeA3(A:18-189)e6vdeA4(A:819-908)e6vdeA5(A:190-311)e6vdeA6(A:312-513)

Chain Bview chain

6 domains

e6vdeB1(B:312-513)e6vdeB2(B:18-189)e6vdeB3(B:675-822)e6vdeB4(B:190-311)e6vdeB5(B:819-908)e6vdeB6(B:500-674)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vdeA1	A:504-674	DNA_pol_A	4970 → 4970.1 → 4970.1.1
2	A	e6vdeA2	A:675-822	DNA_pol_A	4964 → 4964.1 → 4964.1.1
3	A	e6vdeA3	A:18-189	5_3_exonuc_N	2006 → 2006.1 → 2006.1.4
4	A	e6vdeA4	A:819-908	DNA_pol_A	304 → 304.48 → 304.48.1
5	A	e6vdeA5	A:190-311	5_3_exonuc	102 → 102.1 → 102.1.1
6	A	e6vdeA6	A:312-513	DNA_polI_exo1	2484 → 2484.1 → 2484.1.1
7	B	e6vdeB1	B:312-513	DNA_polI_exo1	2484 → 2484.1 → 2484.1.1
8	B	e6vdeB2	B:18-189	5_3_exonuc_N	2006 → 2006.1 → 2006.1.4
9	B	e6vdeB3	B:675-822	DNA_pol_A	4964 → 4964.1 → 4964.1.1
10	B	e6vdeB4	B:190-311	5_3_exonuc	102 → 102.1 → 102.1.1
11	B	e6vdeB5	B:819-908	DNA_pol_A	304 → 304.48 → 304.48.1
12	B	e6vdeB6	B:500-674	DNA_pol_A	4970 → 4970.1 → 4970.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors