ECODEvolutionary Classification of Protein Domains

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PDB 6VXX

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e6vxxA1(A:695-827,A:854-1147)e6vxxA2(A:329-468,A:489-529)e6vxxA3(A:27-143,A:165-308)e6vxxA4(A:309-328,A:530-620,A:641-694)

Chain Bview chain

4 domains

e6vxxB1(B:329-468,B:489-529)e6vxxB2(B:695-827,B:854-1147)e6vxxB3(B:309-328,B:530-620,B:641-694)e6vxxB4(B:27-143,B:165-308)

Chain Cview chain

4 domains

e6vxxC1(C:329-468,C:489-529)e6vxxC2(C:27-143,C:165-308)e6vxxC3(C:695-827,C:854-1147)e6vxxC4(C:309-328,C:530-620,C:641-694)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vxxA1	A:695-827,A:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
2	A	e6vxxA2	A:329-468,A:489-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
3	A	e6vxxA3	A:27-143,A:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
4	A	e6vxxA4	A:309-328,A:530-620,A:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
5	B	e6vxxB1	B:329-468,B:489-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
6	B	e6vxxB2	B:695-827,B:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
7	B	e6vxxB3	B:309-328,B:530-620,B:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
8	B	e6vxxB4	B:27-143,B:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e6vxxC1	C:329-468,C:489-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e6vxxC2	C:27-143,C:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
11	C	e6vxxC3	C:695-827,C:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
12	C	e6vxxC4	C:309-328,C:530-620,C:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors