ECODEvolutionary Classification of Protein Domains

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PDB 6VYB

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e6vybA1(A:695-827,A:855-1147)e6vybA2(A:27-143,A:166-242,A:263-316)e6vybA3(A:317-470,A:490-529)e6vybA4(A:529-620,A:641-694)

Chain Bview chain

4 domains

e6vybB1(B:695-827,B:854-1147)e6vybB2(B:27-140,B:164-242,B:263-316)e6vybB3(B:317-466,B:491-529)e6vybB4(B:529-620,B:641-694)

Chain Cview chain

4 domains

e6vybC1(C:695-827,C:856-1147)e6vybC2(C:27-143,C:165-242,C:264-316)e6vybC3(C:317-470,C:491-529)e6vybC4(C:529-620,C:641-694)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vybA1	A:695-827,A:855-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
2	A	e6vybA2	A:27-143,A:166-242,A:263-316	bCoV_S1_N	10 → 10.1 → 10.1.1
3	A	e6vybA3	A:317-470,A:490-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
4	A	e6vybA4	A:529-620,A:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
5	B	e6vybB1	B:695-827,B:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
6	B	e6vybB2	B:27-140,B:164-242,B:263-316	bCoV_S1_N	10 → 10.1 → 10.1.1
7	B	e6vybB3	B:317-466,B:491-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
8	B	e6vybB4	B:529-620,B:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
9	C	e6vybC1	C:695-827,C:856-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
10	C	e6vybC2	C:27-143,C:165-242,C:264-316	bCoV_S1_N	10 → 10.1 → 10.1.1
11	C	e6vybC3	C:317-470,C:491-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
12	C	e6vybC4	C:529-620,C:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors