PDB 6XAV
ELECTRON MICROSCOPY0 chains45 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
3 domainsChain Cview chain
3 domainsChain Dview chain
3 domainsChain Eview chain
3 domainsChain Gview chain
2 domainsChain Hview chain
2 domainsChain Iview chain
10 domainsChain Jview chain
9 domainsChain Lview chain
1 domainChain Wview chain
1 domainAll Domains (45)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6xavA1 | A:49-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 2 | A | e6xavA2 | A:128-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 3 | B | e6xavB1 | B:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 4 | B | e6xavB2 | B:48-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 5 | B | e6xavB3 | B:128-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 6 | C | e6xavC1 | C:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 7 | C | e6xavC2 | C:48-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 8 | C | e6xavC3 | C:128-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 9 | D | e6xavD1 | D:48-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 10 | D | e6xavD2 | D:128-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 11 | D | e6xavD3 | D:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 12 | E | e6xavE1 | E:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 13 | E | e6xavE2 | E:128-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 14 | E | e6xavE3 | E:48-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 15 | F | e6xavF1 | F:48-127 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 16 | F | e6xavF2 | F:1-10,F:30-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 17 | F | e6xavF3 | F:128-353 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 18 | G | e6xavG1 | G:25-127 | NusA_N | 885 → 885.1 → 885.1.1 |
| 19 | G | e6xavG2 | G:126-200 | S1 | 2 → 2.1 → 2.1.1 |
| 20 | H | e6xavH1 | H:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | H | e6xavH2 | H:4-52,H:179-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | I | e6xavI1 | I:939-982,I:1002-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 23 | I | e6xavI2 | I:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 24 | I | e6xavI3 | I:828-891,I:911-938,I:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 25 | I | e6xavI4 | I:226-234,I:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 26 | I | e6xavI5 | I:1240-1342 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 27 | I | e6xavI6 | I:1-151,I:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 28 | I | e6xavI7 | I:152-225,I:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 29 | I | e6xavI8 | I:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 30 | I | e6xavI9 | I:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 31 | I | e6xavI10 | I:791-827,I:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 32 | J | e6xavJ1 | J:895-931,J:1214-1373 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 33 | J | e6xavJ2 | J:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 34 | J | e6xavJ3 | J:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 35 | J | e6xavJ4 | J:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 36 | J | e6xavJ5 | J:1-341 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 37 | J | e6xavJ6 | J:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 38 | J | e6xavJ7 | J:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 39 | J | e6xavJ8 | J:1023-1132 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 40 | J | e6xavJ9 | J:1133-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 41 | K | e6xavK1 | K:53-166 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 42 | K | e6xavK2 | K:7-52,K:167-220 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 43 | K | e6xavK3 | K:221-234,K:264-315 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 44 | L | e6xavL1 | L:6-117 | NusG | 304 → 304.17 → 304.17.1 |
| 45 | W | e6xavW1 | W:2-56 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors