ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 6XF5

ELECTRON MICROSCOPY0 chains12 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain Aview chain

4 domains

e6xf5A1(A:695-827,A:854-1152)e6xf5A2(A:309-328,A:530-694)e6xf5A3(A:329-529)e6xf5A4(A:27-143,A:165-308)

Chain Bview chain

4 domains

e6xf5B1(B:27-143,B:165-308)e6xf5B2(B:329-529)e6xf5B3(B:695-827,B:854-1152)e6xf5B4(B:309-328,B:530-694)

Chain Cview chain

4 domains

e6xf5C1(C:309-328,C:530-694)e6xf5C2(C:695-827,C:854-1152)e6xf5C3(C:27-143,C:165-308)e6xf5C4(C:329-529)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xf5A1	A:695-827,A:854-1152	CoV_S2	1042 → 1042.1 → 1042.1.1
2	A	e6xf5A2	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
3	A	e6xf5A3	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
4	A	e6xf5A4	A:27-143,A:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
5	B	e6xf5B1	B:27-143,B:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
6	B	e6xf5B2	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
7	B	e6xf5B3	B:695-827,B:854-1152	CoV_S2	1042 → 1042.1 → 1042.1.1
8	B	e6xf5B4	B:309-328,B:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
9	C	e6xf5C1	C:309-328,C:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
10	C	e6xf5C2	C:695-827,C:854-1152	CoV_S2	1042 → 1042.1 → 1042.1.1
11	C	e6xf5C3	C:27-143,C:165-308	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e6xf5C4	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors